GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 17:55:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Scyliorhinus canicula genome assembly, chromosome: 7.
LR744036.1:145916917-145916936
TGTCACATTGCAGCTCAGGTCCCAGCAAAA145916917GCACACCTCCCTCACTCATCCCCATGTGTAGGGCCTGCCACACACCAATC
Lotus japonicus genomic DNA, chromosome 5, clone: LjB21K15, BM1817.
AP010526.1:7623-7642
TTGATAACCACCCCCCAACATGATCACAGA7623GCACACCTCCCTCACTCATCATGTTTTAGCTAGAGACCTAGCTACCATAA
Lotus japonicus genomic DNA, chromosome 5, clone: LjT135A04, TM1816.
AP010527.1:43273-43292
TTGATAACCACCCCCCAACATGATCACAGA43273GCACACCTCCCTCACTCATCATGTTTTAGCTAGAGACCTAGCTACCATAA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:56556838-56556857
TTATGGTAGCTAGGTCTCTAGCTAAAACAT56556838GATGAGTGAGGGAGGTGTGCTCTGTGATCATGTTGGGGGGTGGTTATCAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCACACCTCCCTCACTCATC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCACACCTCCCTCACTCATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.128 | 0.119 | search_plus_done; http://172.18.8.135:50400/match?q=GCACACCTCCCTCACTCATC&k=0&no_gap=0&offset=0&limit=50
0.174 | 0.046 | search_minus_done; http://172.18.8.135:50400/match?q=GATGAGTGAGGGAGGTGTGC&k=0&no_gap=0&offset=0&limit=47
0.175 | 0.001 | cgi_end;

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