GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 15:29:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

E012389-024-012-E14-SP6 MPIZ-ADIS-024-leaf Beta vulgaris cDNA clone 024-012-E14 5-PRIME, mRNA sequence.
BQ586664.1:73-92
CCCATTGACTCTCTCTCCTCAACTTTTTAA73GCACCTCAACAAACACATCCTTATCATCTTTTCTCTTCAATCTTCACTCT
Microcaecilia unicolor genome assembly, chromosome: 11.
LR594642.1:70109860-70109879
TCCTAATGGGCACATGTGGAACTTCTCTTA70109860GGATGTGTTTGTTGAGGTGCTGGAGGTCCAGGATGGATCTGAATCCACCT
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392552.1:55828371-55828390
AGAGTGAAGATTGAAGAGAAAAGATGATAA55828371GGATGTGTTTGTTGAGGTGCTTAAAAAGTTGAGGAGAGAGAGTCAATGGG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392561.1:56998573-56998592
AGAGTGAAGATTGAAGAGAAAAGATGATAA56998573GGATGTGTTTGTTGAGGTGCTTAAAAAGTTGAGGAGAGAGAGTCAATGGG
Isoperla grammatica genome assembly, chromosome: 2.
OX246738.1:67693948-67693967
CCAACAAGTCTGGTGTACTATATTGTGTGC67693948GGATGTGTTTGTTGAGGTGCGTCTATAACTCTAGGGTGTGTATGTAAATG
Napeogenes inachia genome assembly, chromosome: 10.
OY365801.1:9897886-9897905
CACCTTTGTCTCTTCTCCTGAACTACAAGT9897886GGATGTGTTTGTTGAGGTGCTCGACGCCGAGAAGAAGTCAAGCTCTGGGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCACCTCAACAAACACATCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCACCTCAACAAACACATCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.112 | 0.103 | search_plus_done; http://172.18.8.135:50400/match?q=GCACCTCAACAAACACATCC&k=0&no_gap=0&offset=0&limit=50
0.130 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=GGATGTGTTTGTTGAGGTGC&k=0&no_gap=0&offset=0&limit=49
0.133 | 0.003 | cgi_end;

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