GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:32:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Elaeis guineensis putative AT-hook DNA-binding protein (AHP1) mRNA, complete cds.
KC146053.1:1427-1450
GGCCTGGAAGCCCTTTGAACCAGAGCACGG1427GCACGTGCAATAACAGCAACCAACAGGGTTTGTCTAACATGCCGTGGAAATAAC
Elaeis guineensis EST, clone (6lib)_isotig25119.
LM616482.1:303-326
GTTATTTCCACGGCATGTTAGACAAACCCT303GTTGGTTGCTGTTATTGCACGTGCCCGTGCTCTGGTTCAAAGGGCTTCCAGGCC
TSA: Elaeis guineensis isotig01883.Elguifruit mRNA sequence.
JO089136.1:301-324
GTTATTTCCACGGCATGTTAGACAAACCCT301GTTGGTTGCTGTTATTGCACGTGCCCGTGCTCTGGTTCAAAGGGCTTCCAGGCC
TSA: Elaeis guineensis isotig01884.Elguifruit mRNA sequence.
JO089137.1:301-324
GTTATTTCCACGGCATGTTAGACAAACCCT301GTTGGTTGCTGTTATTGCACGTGCCCGTGCTCTGGTTCAAAGGGCTTCCAGGCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCACGTGCAATAACAGCAACCAAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCACGTGCAATAACAGCAACCAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.233 | 0.224 | search_plus_done; http://172.18.8.135:50400/match?q=GCACGTGCAATAACAGCAACCAAC&k=0&no_gap=0&offset=0&limit=50
0.468 | 0.235 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGGTTGCTGTTATTGCACGTGC&k=0&no_gap=0&offset=0&limit=49
0.470 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).