GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-09 09:27:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Coregonus sp. 'balchen' genome assembly, chromosome: 12.
LR778264.1:37745628-37745647
CACAGTTCATGGGGTCGCACACCACCGCCA37745628GCACGTTGGTGATGAAGAATGGACACCACATGACCACAAACAGGAAGAAG
Coregonus sp. 'balchen' genome assembly, chromosome: 13.
LR778265.1:8381939-8381958
TTATTATCGAGTCCTCACACAACACACTCA8381939GCACGTTGGTGATGAAGAATGGACACCACATAATCAGGAAGAGGAAAAAC
Brassica rapa subsp. oleifera cultivar Inbred line 'Chiifu' clone KBrH001D17, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces.
AC172865.1:65985-66004
TTGTAAGCATCTTAAGATTTCACGTGGCCT65985GCACGTTGGTGATGAAGAATCTACGATGACCGCCGTGTCTACTATCTCCA
Brassica napus cultivar Xiang5A chromosome 14.
CP123889.1:26218966-26218985
TTGTAAGCATCTTAAGATTTCACGTGGCCT26218966GCACGTTGGTGATGAAGAATCTACGATGACCGCCGTGTCTACTATCTCCA
Brassica napus genome assembly, chromosome: A04.
HG994358.1:20745069-20745088
TTGTAAGCATCTTAAGATTTCACGTGGCCT20745069GCACGTTGGTGATGAAGAATCTACGATGACCGCCGTGTCTACTATCTCCA
Brassica rapa genome, scaffold: A04.
LR031576.1:19331693-19331712
TTGTAAGCATCTTAAGATTTCACGTGGCCT19331693GCACGTTGGTGATGAAGAATCTACGATGACCGCCGTGTCTACTATCTCCA
Brassica rapa genome assembly, chromosome: A04.
LS974620.2:19750466-19750485
TTGTAAGCATCTTAAGATTTCACGTGGCCT19750466GCACGTTGGTGATGAAGAATCTACGATGACCGCCGTGTCTACTATCTCCA
Melanotus villosus genome assembly, chromosome: 1.
OY720418.1:141122800-141122819
GTATGCAGAGAGCCAAATAGATTCAGAAGA141122800GCACGTTGGTGATGAAGAATTCCAGACTGATCTAGTAAGTGGTGACGATG
Scophthalmus maximus chromosome 14.
CP026256.1:20548914-20548933
GTTTTTCCTCTTTGTGGTCATGTGGTGTCC20548914ATTCTTCATCACCAACGTGCTGGTGGTGGTGTGCGACCCGGCGGTGTGCG
Coregonus sp. 'balchen' genome assembly, chromosome: 27.
LR778279.1:37474449-37474468
GTTTTTCCTCTTCCTGATTATGTGGTGTCC37474449ATTCTTCATCACCAACGTGCTGAGTGTGTTGTGTGAGGACTCGATAATAA
Scophthalmus maximus genome assembly, chromosome: 14.
OY978265.1:20860848-20860867
GTTTTTCCTCTTCGTGGTCATGTGGTGTCC20860848ATTCTTCATCACCAACGTGCTGGTGGTGGTGTGCGACCCGGCGGTGTGCG
Sequence 95488 from Patent WO2008034648.
FB876215.1:2321-2340
TGGAGATAGTAGACACGGCGGTCATCGTAG2321ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Sequence 95488 from Patent EP2090662.
HB746274.1:2321-2340
TGGAGATAGTAGACACGGCGGTCATCGTAG2321ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
WO 2019017406-A/20: Method for producing Hydrocarbons using Microalgae.
MA824154.1:494214-494233
CTTGTCGTCCGACCAAGGCAACCTCGGGAC494214ATTCTTCATCACCAACGTGCGCCTCGTGTGGCACGCGAACCTCGCGGAGA
JP 2019017305-A/20: Method for producing Hydrocarbons using Microalgae.
MA847394.1:494214-494233
CTTGTCGTCCGACCAAGGCAACCTCGGGAC494214ATTCTTCATCACCAACGTGCGCCTCGTGTGGCACGCGAACCTCGCGGAGA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB092D10, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.
AC189525.2:6716-6735
TGGAGATAGTAGACACGGCGGTCATCGTAG6716ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa BcRK6 gene for receptor kinase 6, complete cds.
AB041622.1:4001-4020
TGGAGATAGTAGACACGGCGGTCATCGTAG4001ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica napus cultivar Xiang5A chromosome 14.
CP123889.1:25872347-25872366
TGGAGATAGTAGACACGGCGGTCATCGTAG25872347ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica napus genome assembly, chromosome: A04.
HG994358.1:20384340-20384359
TGGAGATAGTAGACACGGCGGTCATCGTAG20384340ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa SUI1-1 gene for SRK like receptor kinase, complete cds.
LC088707.1:3334-3353
TGGAGATAGTAGACACGGCGGTCATCGTAG3334ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa SUI1-2 gene for SRK like receptor kinase, complete cds.
LC088708.1:3298-3317
TGGAGATAGTAGACACGGCGGTCATCGTAG3298ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa SUI1-3 gene for SRK like receptor kinase, complete cds.
LC088709.1:3280-3299
TGGAGATAGTAGACACGGCGGTCATCGTAG3280ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa SUI1-4 gene for SRK like receptor kinase, complete cds.
LC088710.1:3250-3269
TGGAGATAGTAGACACGGCGGTCATCGTAG3250ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa SUI1-5 gene for SRK like receptor kinase, complete cds.
LC088711.1:3227-3246
TGGAGATAGTAGACACGGCGGTCATCGTAG3227ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa SUI1-6 gene for SRK like receptor kinase, complete cds.
LC088712.1:3301-3320
TGGAGATAGTAGACACGGCGGTCATCGTAG3301ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa SUI1-7 gene for SRK like receptor kinase, complete cds.
LC088713.1:3339-3358
TGGAGATAGTAGACACGGCGGTCATCGTAG3339ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa SUI1-8 gene for SRK like receptor kinase, complete cds.
LC088714.1:3304-3323
TGGAGATAGTAGACACGGCGGTCATCGTAG3304ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa SUI1-9 gene for SRK like receptor kinase, complete cds.
LC088715.1:3294-3313
TGGAGATAGTAGACACGGCGGTCATCGTAG3294ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa subsp. pekinensis Chihiri 70 BrSUI1 pseudogene, complete sequence, allele: sui-t10.
LC641784.1:3245-3264
TGGAGATAGTAGACACGGCGGTCATCGTAG3245ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa subsp. pekinensis Kasumi hakusai BrSUI1 gene for SRK like receptor kinase, complete cds, allele: SUI1-12.
LC641785.1:3248-3267
TGGAGATAGTAGACACGGCGGTCATCGTAG3248ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa subsp. pekinensis Menkoi BrSUI1 gene for SRK like receptor kinase, complete cds, allele: SUI1-11.
LC641786.1:3239-3258
TGGAGATAGTAGACACGGCGGTCATCGTAG3239ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa subsp. pekinensis Hakuei hakusai BrSUI1 gene for SRK like receptor kinase, complete cds, allele: SUI1-10.
LC641787.1:3232-3251
TGGAGATAGTAGACACGGCGGTCATCGTAG3232ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa genome, scaffold: A04.
LR031576.1:18920862-18920881
TGGAGATAGTAGACACGGCGGTCATCGTAG18920862ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA
Brassica rapa genome assembly, chromosome: A04.
LS974620.2:19343378-19343397
TGGAGATAGTAGACACGGCGGTCATCGTAG19343378ATTCTTCATCACCAACGTGCAGGCCACGTGAAATCTTAAGATGCTTACAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:


GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).