GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 12:49:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium pratense DNA, clone:RCG01630.
DE213412.1:85-104
TAAGATTGTACTGCAACTGATAAATAAAAA85GCACTGACCTTTCATCAGCAATAGTAATGTCACGCTTTGCAACACTCTCA
Trifolium pratense DNA, clone:RCG01758.
DE213513.1:85-104
TAAGATTGTACTGCAACTGATAAATAAAAA85GCACTGACCTTTCATCAGCAATAGTAATGTCACGCTTTGCAACACTCTCA
Trifolium pratense DNA, clone:RCG03504.
DE214911.1:85-104
TAAGATTGTACTGCAACTGATAAATAAAAA85GCACTGACCTTTCATCAGCAATAGTAATGTCACGCTTTGCAACACTCTCA
Trifolium pratense DNA, clone:RCG04162.
DE215463.1:85-104
TAAGATTGTACTGCAACTGATAAATAAAAA85GCACTGACCTTTCATCAGCAATAGTAATGTCACGCTTTGCAACACTCTCA
Trifolium pratense DNA, clone:RCG04454.
DE215704.1:85-104
TGAGATTGTACTGCAACTGATAAATAAAAA85GCACTGACCTTTCATCAGCAATAGTAATGTCACGCTTTGCAACACTCTCA
Trifolium pratense DNA, clone:RCG16935.
DE224935.1:170-189
TAAGATTGTACTGCAACTGATAAATAAAAA170GCACTGACCTTTCATCAGCAATAGTAATGTCACGCTTTGCAACACTCTCA
Trifolium pratense DNA, clone:RCG01040.
DE246691.1:85-104
TAAGATTGTACTGCAACTGATAAATAAAAA85GCACTGACCTTTCATCAGCAATAGTAATGTCACGCTTTGCAACACTCTCA
Trifolium pratense DNA, clone:RCG01032.
DE246687.1:177-196
TGAGAGTGTTGCAAAGCGTGACATTACTAT177TGCTGATGAAAGGTCAGTGCTTTTTATTTATCAGTTGCAGTACAATCGTA
jld0003dB04.f TP__Sa Trifolium pratense genomic clone jld0003dB04 5', genomic survey sequence.
JJ944356.1:364-383
TGAGAGTGTTGCAAAGCGTGACATTACTAT364TGCTGATGAAAGGTCAGTGCTTTTTATTTATCAGTTGCAGTACAATCTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCACTGACCTTTCATCAGCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCACTGACCTTTCATCAGCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.216 | 0.207 | search_plus_done; http://172.18.8.135:50400/match?q=GCACTGACCTTTCATCAGCA&k=0&no_gap=0&offset=0&limit=50
0.323 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTGATGAAAGGTCAGTGC&k=0&no_gap=0&offset=0&limit=43
0.324 | 0.001 | cgi_end;

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