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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-05 12:54:18, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus ioensis cultivar PI590015 chromosome 1.
CP154741.1:3850080-3850099
GCTTCCCTTACTTGTTTGACCCAAGTTTTG3850080GCACTGTCAGTCACCATGTCTCCTTCTGCTGCTGCTGCTGCTGCGTCTGC
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4152043-4152062
GCTTCCCTTACTTGTTTGACCCAAGTTTTG4152043GCACTGTCAGTCACCATGTCACCTTCTGCTGCTGCTGCTGCTTTAGCATC
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4357302-4357321
GCTTCCCTTACTTGTTTGACCCAAGTTTTG4357302GCACTGTCAGTCACCATGTCTCCTTCTGCTGCTGCTGCTGCGTCTGCATC
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4388025-4388044
GCTTCCCTTACTTGTTTGACCCAAGTTTTG4388025GCACTGTCAGTCACCATGTCTCCTTCTGCTGCTGCTGCTGCTGCTTTAGC
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:4320300-4320319
GCTTCCCTTACTTGTTTGACCCAAGTTTTG4320300GCACTGTCAGTCACCATGTCTCCTTCTGCTGCTGCTGCTGCTTTGGCATC
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:3320555-3320574
GCTTCCCTTACTTGTTCGACCCAAGTTTTG3320555GCACTGTCAGTCACCATGTCTCCTTCTGCTGCTGCTGCTTTAGCATCTGC
Karpatiosorbus bristoliensis genome assembly, chromosome: 15C.
OZ287419.1:3251055-3251074
GCTTCCCTTACTTGTTTGACCCAAGTTTTG3251055GCACTGTCAGTCACCATGTCTCCTTCTGCTGCTGCTGCTGCTGCTTTAGC
Karpatiosorbus bristoliensis genome assembly, chromosome: 15A.
OZ287469.1:3255017-3255036
GCTTCCCTTACTTGTTTGACCCAAGTTTTG3255017GCACTGTCAGTCACCATGTCTCCTTCTGCTGCTGCTGCTGCTGCTTTAGC
Karpatiosorbus bristoliensis genome assembly, chromosome: 15B.
OZ287470.1:3732493-3732512
GCTTCCCTTACTTGTTTGACCCAAGTTTTG3732493GCACTGTCAGTCACCATGTCTCCTTCTGCTGCTGCTGCTGCTTTAGCGTC
Xyrichtys novacula genome assembly, chromosome: 21.
OY660884.1:15472151-15472170
CGACATGACTGTTTGCCGTGAGCTATGTGT15472151GCACTGTCAGTCACCATGTCCTCACATATTACACTTTACCTGCACCGTCA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:40157273-40157292
GCAGACGCAGCAGCAGCAGCAGCAGAAGGA40157273GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:27947275-27947294
GACGCTAAAGCAGCAGCAGCAGCAGAAGGA27947275GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:27971124-27971143
GACGCTAAAGCAGCAGCAGCAGCAGAAGGA27971124GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:29570910-29570929
GACGCTAAAGCAGCAGCAGCAGCAGAAGGA29570910GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:29651930-29651949
GATGCTAAAGCAGCAGCAGCAGCAGAAGGT29651930GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:29234219-29234238
GACGCAGCAGCAGCAGCAGCAGCAGAAGGA29234219GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:29267381-29267400
GCTAAAGCAGCAGCAGCAGCAGCAGAAGGA29267381GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:27962751-27962770
GCAGACGCAGCAGCAGCAGCAGCAGAAGGA27962751GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus domestica cultivar Red Fuji chromosome 1.
CP147793.1:29323305-29323324
GACGCTAAAGCAGCAGCAGCAGCAGAAGGA29323305GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus domestica cultivar Red Fuji chromosome 1.
CP147793.1:29448333-29448352
GCTAAAGCAGCAGCAGCAGCAGCAGAAGGA29448333GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus domestica cultivar Red Fuji chromosome 1.
CP147810.1:28510681-28510700
GCTAAAGCAGCAGCAGCAGCAGCAGAAGGA28510681GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus ioensis cultivar PI590015 chromosome 1.
CP154724.1:28335670-28335689
GACGCAGCAGCAGCAGCAGCAGCAGAAGGA28335670GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus coronaria cultivar PI590014 chromosome 1.
CP154758.1:29952973-29952992
GACGCAGCAGCAGCAGCAGCAGCAGAAGGA29952973GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus coronaria cultivar PI590014 chromosome 1.
CP154775.1:30967337-30967356
GCAGACGCAGCAGCAGCAGCAGCAGAAGGA30967337GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus domestica cultivar WA 38 chromosome 1B.
CP165684.1:29786070-29786089
GACGCAGCAGCAGCAGCAGCAGCAGAAGGA29786070GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus domestica cultivar WA 38 chromosome 1B.
CP165684.1:29819240-29819259
GCTAAAGCAGCAGCAGCAGCAGCAGAAGGA29819240GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus domestica cultivar WA 38 chromosome 1A.
CP165701.1:29042032-29042051
GACGCAGCAGCAGCAGCAGCAGCAGAAGGA29042032GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus domestica cultivar WA 38 chromosome 1A.
CP165701.1:29075202-29075221
GCTAAAGCAGCAGCAGCAGCAGCAGAAGGA29075202GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus domestica cultivar Golden Delicious chromosome 01.
CP168765.1:28097646-28097665
GACGCAGCAGCAGCAGCAGCAGCAGAAGGA28097646GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus domestica cultivar Golden Delicious chromosome 01.
CP168765.1:28130810-28130829
GCTAAAGCAGCAGCAGCAGCAGCAGAAGGA28130810GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus domestica cultivar Golden Delicious chromosome 01.
CP168782.1:28477872-28477891
GACGCAGCAGCAGCAGCAGCAGCAGAAGGA28477872GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus domestica cultivar Golden Delicious chromosome 01.
CP168782.1:28511036-28511055
GCTAAAGCAGCAGCAGCAGCAGCAGAAGGA28511036GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25976731-25976750
GCTAAAGCAGCAGCAGCAGCAGCAGAAGGA25976731GACATGGTGACTGACAGTGCCAAAACCTGGGTCAAGCAAGTAAGGGAAGC
Malus domestica genome assembly, chromosome: 1.
OU696677.1:26067650-26067669
GCTAAAGCAGCAGCAGCAGCAGCAGAAGGA26067650GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29782312-29782331
GCTAAAGCAGCAGCAGCAGCAGCAGAAGGA29782312GACATGGTGACTGACAGTGCCAAAACCTGGGTCAAGCAAGTAAGGGAAGC
Malus domestica genome assembly, chromosome: 1.
OU744953.1:29156598-29156617
GACGCTAAAGCAGCAGCAGCAGCAGAAGGA29156598GACATGGTGACTGACAGTGCCAAAACTTGGGTCAAACAAGTAAGGGAAGC
Malus domestica genome assembly, chromosome: 1.
OU744991.1:26255986-26256005
GCTAAAGCAGCAGCAGCAGCAGCAGAAGGA26255986GACATGGTGACTGACAGTGCCAAAACCTGGGTCAAGCAAGTAAGGGAAGC
Nematostella vectensis genome assembly, chromosome: 8.
OW051992.1:5979441-5979460
TTTCTAAGCAAAGAGCCCCCGCTCTCGTGT5979441GACATGGTGACTGACAGTGCATTCCAGCAGCTAGAACATGCTACTGGCGG
Pycnogonum litorale genome assembly, chromosome: 26.
OZ207712.1:3290570-3290589
CACAGCATCGAAATCGACTTTTGATGCGGC3290570GACATGGTGACTGACAGTGCATTTTATATGACAGATACAACACAAGGTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCACTGTCAGTCACCATGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCACTGTCAGTCACCATGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.273 | 0.264 | search_plus_done; http://172.18.8.135:50900/match?q=GCACTGTCAGTCACCATGTC&k=0&no_gap=0&offset=0&limit=50
0.459 | 0.185 | search_minus_done; http://172.18.8.135:50900/match?q=GACATGGTGACTGACAGTGC&k=0&no_gap=0&offset=0&limit=40
0.479 | 0.020 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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