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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:24:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

GH_MBb0007A14r GH_MBb Gossypium hirsutum genomic clone GH_MBb0007A14r, genomic survey sequence.
DX536354.2:88-107
TAGATTTCAGATCCTGCACCAGCTTCTTAT88GCACTGTGTTCAAGCTTCTGCAGTCCAAGCAGTCCCCAAGAAGCACATGC
GH_TBb080H19f Gossypium hirsutum TM-1 BAC library Gossypium hirsutum genomic, genomic survey sequence.
KO200876.1:676-695
TAGATTTCAGATCCTGCACCAGCTTCTTAT676GCACTGTGTTCAAGCTTCTGCAGTCCAAGCAGTCCCCAAGAAGCACATGC
Gossypium turneri isolate D10-2 chromosome D10_01.
CP032571.1:7315265-7315284
TAGATTTCAGATCCTGCACCAGCTTCTTAT7315265GCACTGTGTTCAAGCTTCTGCAGTCCAAGCAGTCCCCAAGAAGCACATGC
Gossypium herbaceum isolate Zhongcao1 chromosome 1.
CP106687.1:9903434-9903453
TAGATTTCAGATCCTGCACCAGCTTCTTAT9903434GCACTGTGTTCAAGCTTCTGCAGTCCAAGCAGTCCCCAAGAAGCACATGC
Gossypium bickii isolate GPG1lz chromosome 10.
CP106713.1:44660749-44660768
TAGATTTCAGATCCTGCACCAGCTTCTTAT44660749GCACTGTGTTCAAGCTTCTGCAATCCAAGCAGTCCCCAAGAAGCACATGC
Gossypium bickii isolate GPG1lz chromosome 10.
CP106713.1:46436661-46436680
TAGATTTCAGATCCTGCACCAGCTTCTTAT46436661GCACTGTGTTCAAGCTTCTGCAATCCAAGCAGTCCCCAAGAAGCACATGC
Gossypium bickii isolate GPG1lz chromosome 10.
CP106713.1:46600745-46600764
TAGGTTTCAGATCCTGCACGAGCTTCTTAT46600745GCACTGTGTTCAAGCTTCTGCAGTCCAAGCAGTCCCCAAGAAGCACATGC
Gossypium bickii isolate GPG1lz chromosome 10.
CP106713.1:46621343-46621362
TAGGTTTCAGATCCTGCACGAGCTTCTTAT46621343GCACTGTGTTCAAGCTTCTGCAGTCCAAGCAGTCCCCAAGAAGCACATGC
Gossypium bickii isolate GPG1lz chromosome 10.
CP106713.1:46641928-46641947
TAGGTTTCAGATCCTGCACGAGCTTCTTAT46641928GCACTGTGTTCAAGCTTCTGCAGTCCAAGCAGTCCCCAAGAAGCACATGC
Gossypium bickii isolate GPG1lz chromosome 10.
CP106713.1:113710866-113710885
TGGATTTCAGATCCTGCACCAGCTTCTTAT113710866GCACTGTGTTCAAGCTTCTGCAATCCAAGCAGTCCCCAAGAAGCACATGC
Gossypium rotundifolium isolate GPK201 chromosome 1.
CP106722.1:17244705-17244724
TAGATTTTAGATCCTGCACCAGCTTCTTAT17244705GCACTGTGTTCAAGCTTCTGCAGTCCAAGCAGTCCCCAAGAAGCACATGC
Gossypium rotundifolium isolate GPK201 chromosome 10.
CP106731.1:103888738-103888757
TAGATTTCAGATCCCGCACCAGCTTCTTAT103888738GCACTGTGTTCAAGCTTCTGCAATCCAAGCAGTCCCCAAGAAGCACATGC
Gallus gallus breed Huxu chromosome 8.
CP100562.1:12690722-12690741
TTGTATGCTGTTTAACAAAGGCAGGTAGAA12690722CAGAAGCTTGAACACAGTGCCAAGAAACTGCATGAAAACAAACCAAAAAA
GR__Eb0036M04.r GR__Eb Gossypium raimondii cDNA clone GR__Eb0036M04 3', mRNA sequence.
CO106217.1:360-379
GCATGTGCTTCTTGGGGACTGCTTGGACTG360CAGAAGCTTGAACACAGTGCATAAGAAGCTGGTGCAGGATCTGAAATCTA
Otolemur garnettii clone CH256-382O10, WORKING DRAFT SEQUENCE, 4 ordered pieces.
AC148791.2:146418-146437
GCACGCATTCATCAAGGAGATGAATCCCTC146418CAGAAGCTTGAACACAGTGCAAGAGAGAACTGGTGAGCCTGAAGTAAGTC
Otolemur garnettii clone CH256-85J20, WORKING DRAFT SEQUENCE, 7 ordered pieces.
AC148858.2:17426-17445
GCACGCATTCATCAAGGAGATGAATCCCTC17426CAGAAGCTTGAACACAGTGCAAGAGAGAACTGGTGAGCCTGAAGTAAGTC
Gossypioides kirkii chromosome KI_01.
CP032244.1:33219241-33219260
GCATGTGCTTCTTGGGGACTGCTTGGACTG33219241CAGAAGCTTGAACACAGTGCATAAGAAGCTGGTCCAGGATCTGAAGTCTA
Gossypium raimondii isolate D5-4 chromosome D5_01.
CP032553.1:49642400-49642419
GCATGTGCTTCTTGGGGACTGCTTGGACTG49642400CAGAAGCTTGAACACAGTGCATAAGAAGCTGGTGCAGGATCTGAAATCTA
Gossypium herbaceum isolate GPA1alz chromosome 1.
CP106699.1:115875753-115875772
GCATGTGCTTCTTGGGGACTGCTTGGACTG115875753CAGAAGCTTGAACACAGTGCATAAGAAGCTGGTGCAGGATCTGAAATCTA
Gossypium bickii isolate GPG1lz chromosome 10.
CP106713.1:46459381-46459400
GCATGTGCTTCTTGGGGACTGCTTGGATTG46459381CAGAAGCTTGAACACAGTGCATAAGAAGCTGGTGCAGGATCTGAAATCTA
Portevinia maculata genome assembly, chromosome: 1.
OX454525.1:52111829-52111848
TTACTAACTAACTGTAAGGTGTAAATCCGC52111829CAGAAGCTTGAACACAGTGCTCATATCTGGTCCACTGCACCGTTAACAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCACTGTGTTCAAGCTTCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCACTGTGTTCAAGCTTCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.257 | 0.248 | search_plus_done; http://172.18.8.135:50400/match?q=GCACTGTGTTCAAGCTTCTG&k=0&no_gap=0&offset=0&limit=50
0.427 | 0.170 | search_minus_done; http://172.18.8.135:50400/match?q=CAGAAGCTTGAACACAGTGC&k=0&no_gap=0&offset=0&limit=38
0.433 | 0.006 | cgi_end;

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