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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:47:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys kempi genome assembly, chromosome: 8.
OU015362.1:98517443-98517462
CCTAAGCTGCCTGCAGGGTGAGAAAGTGAC98517443GCAGAGAACCCCTGAAAACAGGAAGGGACATCCATCCCTCTGCCACCAAA
Otolemur garnettii clone CH256-411G20, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC146495.1:176396-176415
GCACTTTTGCCACCATCCTCCAGTCTTTCT176396GCAGAGAACCCCTGAAAACAATCTTGAAAAAAAGTTGGAGGACTCACTTT
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2435246-2435265
ACATATACATGCATCCCAAATTGCAAATTT2435246GCAGAGAACCCCTGAAAACACTTAAAATCAATATATATAAAAAAAAAAAA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2393592-2393611
ACATATACATGCATCCCAAATTGCAAATTT2393592GCAGAGAACCCCTGAAAACACTTAAAATCAATAAAAAAAAAAAAAAAAAC
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:2587893-2587912
ACATATACATGCATCCCAAATTGCAAATTT2587893GCAGAGAACCCCTGAAAACACTTCAAATCAATAAAAAAACAAAACAGAAC
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2413220-2413239
ACATATACATGCATCCCAAATTGCAAATTT2413220GCAGAGAACCCCTGAAAACACTTAAAATCAATAAAAAAAAAAAAAAACAG
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:2453940-2453959
ACATATACATGCATCCCAAATTGCAAATTT2453940GCAGAGAACCCCTGAAAACACTTAAAATCAATAAAAAAAAAAAAAAAAAA
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2543178-2543197
ACATATACATGCATCCCAAATTGCAAATTT2543178GCAGAGAACCCCTGAAAACACTTAAAATCAATAAAAAAAAAAAAAAACAG
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2535749-2535768
ACATATACATGCATCCCAAATTGCAAATTT2535749GCAGAGAACCCCTGAAAACACTTAAAATCAATAAAAAAAAAAAAAAACAG
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2592565-2592584
ACATATACATGCATCCCAAATTGCAAATTT2592565GCAGAGAACCCCTGAAAACACTTAAAATCAATAAAAAAAAAAAAAAAAAA
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2627065-2627084
ACATATACATGCATCCCAAATTGCAAATTT2627065GCAGAGAACCCCTGAAAACACTTAAAATCAATAAAAAAAAAAAAAAACAG
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2604000-2604019
ACATATACATGCATCCCAAATTGCAAATTT2604000GCAGAGAACCCCTGAAAACACTTAAAATAAAAAAAAAATAAAAAAACAGA
Acleris literana genome assembly, chromosome: 9.
OX335677.1:3229606-3229625
CATTCGGGCAAATGAGAGTTCGGGGAAACG3229606GCAGAGAACCCCTGAAAACATCATGTTTTCAGCAGAAAATAGCGTTCGAT
Acleris holmiana genome assembly, chromosome: 20.
OX438782.1:15808338-15808357
CCCATTTGCCAAAGATTTGTCGGTAAAAAG15808338GCAGAGAACCCCTGAAAACATTTTAATTTCAGCAGAAAGTAGTGTGCGAT
Acleris holmiana genome assembly, chromosome: 20.
OX438782.1:15893241-15893260
CCCATTTGCCAAAGATTTGTCGGTAAAAAG15893241GCAGAGAACCCCTGAAAACATTTTAATTTCAGCAGAAAGTAGTGTGCGAT
Onchidella celtica genome assembly, chromosome: 10.
OZ007576.1:32444986-32445005
GAATAAAAAAAGAGGTGTAAAATACCAAGG32444986GCAGAGAACCCCTGAAAACAAAGAGCTCAATACACGCCCCCCCCCCCCAA
Maratus michaelseni genome assembly, chromosome: X1.
OZ007586.1:3339230-3339249
TTAAAAGAGAAAAAAGGGGGGTTCAGGGGG3339230GCAGAGAACCCCTGAAAACAAATAAACAACTTTTTCATACCCTCCCCCAA
Mdfw2001o07.y1 Mdfw Malus domestica cDNA clone Mdfw2001o07 5', mRNA sequence.
CN444827.1:30-49
TTTTTTTTTTTTTTTTTATTGATTTTAAG30TGTTTTCAGGGGTTCTCTGCAAATTTGCAATTTGGGATGCATGTATATGT
Otolemur garnettii clone CH256-340C3, WORKING DRAFT SEQUENCE, 3 unordered pieces.
AC146640.1:153887-153906
AAAGTGAGTCCTCCAACTTCTTTTCAAGAT153887TGTTTTCAGGGGTTCTCTGCAGAAAGACTGGAGGATGGTGGCAAAAGTGC
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38702098-38702117
GTTCTGTTTTGTTTTTTTATTGATTTGAAG38702098TGTTTTCAGGGGTTCTCTGCAAATTTGCAATTTGGGATGCATGTATATGT
Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:38531493-38531512
AAAATTTATTTATTTTTTATCAATTTTAAT38531493TGTTTTCAGGGGTTCTCTGCAAATTTGCAATTTGGGTGTGTATGTATATG
Pyrus communis genome assembly, chromosome: 8.
OY757075.1:25671612-25671631
CAAAGTCAGGTTTTTTTTATTGATTTTAAG25671612TGTTTTCAGGGGTTCTCTGCAAATTTGCAATTTGGGATGTATGTATATGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAGAGAACCCCTGAAAACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGAGAACCCCTGAAAACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.328 | 0.319 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGAGAACCCCTGAAAACA&k=0&no_gap=0&offset=0&limit=50
0.465 | 0.137 | search_minus_done; http://172.18.8.135:50400/match?q=TGTTTTCAGGGGTTCTCTGC&k=0&no_gap=0&offset=0&limit=33
0.468 | 0.003 | cgi_end;

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