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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 20:45:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 6, clone: LjT25M04, TM1145.
AP007842.2:80342-80361
ACGTGCTTGATTCTCGCCATGGAAACGCTT80342GCAGAGAAGAAACGGCTTCGAATTTTGATTTTCCAATTTGCCTCCTTTTC
Lotus japonicus genomic DNA, chromosome 6, clone: LjT17H19, TM0041.
AP004511.1:35410-35429
ACGTGCTTGATTCTCGCCATGGAAACGCTT35410GCAGAGAAGAAACGGCTTCGAATTTTGATTTTCCAATTTGCCTCCTTTTC
Sarcophaga carnaria genome assembly, chromosome: 4.
OY283152.1:54625050-54625069
AAGCTCCCTCCAAATATCCTGCACTTTATA54625050GCAGAGAAGAAACGGCTTCGCAGAATTCTGTATAGAACAGGGGACCTGTC
LJNBU50TF JCVI-LJ3 Lotus japonicus cDNA 5', mRNA sequence.
GO036844.1:26-45
GGAGGCAAATTGGAAAATCAAAATT26CGAAGCCGTTTCTTCTCTGCAAGCGTTTCCATGGCGAGAATCAAGCACGT
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:49553404-49553423
GAAAAGGAGGCAAATTGGAAAATCAAAATT49553404CGAAGCCGTTTCTTCTCTGCAAGCGTTTCCATGGCGAGAATCAAGCACGT
Lotus japonicus clone JCVI-FLLj-13P9 unknown mRNA.
BT137822.1:26-45
GGAGGCAAATTGGAAAATCAAAATT26CGAAGCCGTTTCTTCTCTGCAAGCGTTTCCATGGCGAGAATCAAGCACGT
Lotus japonicus centromere-specific histone H3 variant (CenH3) mRNA, complete cds.
KF214777.1:31-50
GAAAAGGAGGCAAATTGGAAAATCAAAATT31CGAAGCCGTTTCTTCTCTGCAAGCGTTTCCATGGCGAGAATCAAGCACGT
Sarcophaga subvicina genome assembly, chromosome: 3.
OW388082.2:69884147-69884166
GACAGGTCCCCTGTTCTATACAGAATTCTG69884147CGAAGCCGTTTCTTCTCTGCTATAAAGTGCAGGATATTTGGAGGGAGCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAGAGAAGAAACGGCTTCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGAGAAGAAACGGCTTCG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.364 | 0.355 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGAGAAGAAACGGCTTCG&k=0&no_gap=0&offset=0&limit=50
0.499 | 0.135 | search_minus_done; http://172.18.8.135:50400/match?q=CGAAGCCGTTTCTTCTCTGC&k=0&no_gap=0&offset=0&limit=47
0.502 | 0.003 | cgi_end;

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