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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-03-14 20:59:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus musculus lat3 mRNA for L-type amino acid transporter 3, complete cds.
AB103034.1:1285-1304
GACTGGTGGCAAGGAACGTGAGACAAATGA1285GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
Mus musculus BAC clone RP23-125A8 from 2, complete sequence.
AC122857.2:97865-97884
TGTCTCTCCTCTACCCACAGAGACAAATGA97865GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mouse DNA sequence from clone RP23-399J8 on chromosome 2.
AL928914.15:139424-139443
TGTCTCTCCTCTACCCACAGAGACAAATGA139424GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus solute carrier family 43, member 1, mRNA (cDNA clone MGC:59491 IMAGE:6330614), complete cds.
BC053747.1:1113-1132
GACTGGTGGCAAGGAACGTGAGACAAATGA1113GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
Mus musculus genome assembly, chromosome: 2.
OW971562.1:81789064-81789083
TGTCTCTCCTCTACCCACAGAGACAAATGA81789064GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus genome assembly, chromosome: 2.
OW971574.1:81912009-81912028
TGTCTCTCCTCTACCCACAGAGACAAATGA81912009GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus genome assembly, chromosome: 2.
OW971595.1:81695416-81695435
TGTCTCTCCTCTACCCACAGAGACAAATGA81695416GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus domesticus genome assembly, chromosome: 2.
OW971624.1:81720872-81720891
TGTCTCTCCTCTACCCACAGAGACAAATGA81720872GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus genome assembly, chromosome: 2.
OW971637.1:81744529-81744548
TGTCTCTCCTCTACCCACAGAGACAAATGA81744529GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus molossinus genome assembly, chromosome: 2.
OW971659.1:81665871-81665890
TGTCTCTCCTCTACCCACAGAGACAAATGA81665871GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus genome assembly, chromosome: 2.
OW971710.1:81127759-81127778
TGTCTCTCCTCTACCCACAGAGACAAATGA81127759GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus genome assembly, chromosome: 2.
OW971721.1:81703934-81703953
TGTCTCTCCTCTACCCACAGAGACAAATGA81703934GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus genome assembly, chromosome: 2.
OW971742.1:81816697-81816716
TGTCTCTCCTCTACCCACAGAGACAAATGA81816697GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus musculus genome assembly, chromosome: 2.
OW971763.1:81683243-81683262
TGTCTCTCCTCTACCCACAGAGACAAATGA81683243GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus genome assembly, chromosome: 2.
OW971784.1:81781362-81781381
TGTCTCTCCTCTACCCACAGAGACAAATGA81781362GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus genome assembly, chromosome: 2.
OW971805.1:81740769-81740788
TGTCTCTCCTCTACCCACAGAGACAAATGA81740769GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus castaneus genome assembly, chromosome: 2.
OW971836.1:81235018-81235037
TGTCTCTCCTCTACCCACAGAGACAAATGA81235018GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus genome assembly, chromosome: 2.
OW971855.1:81884097-81884116
TGTCTCTCCTCTACCCACAGAGACAAATGA81884097GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus genome assembly, chromosome: 2.
OX389796.1:91376507-91376526
TGTCTCTCCTCTACCCACAGAGACAAATGA91376507GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus genome assembly, chromosome: 2.
OX390146.1:83491849-83491868
TGTCTCTCCTCTACCCACAGAGACAAATGA83491849GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus genome assembly, chromosome: 2.
OX439015.1:88790408-88790427
TGTCTCTCCTCTACCCACAGAGACAAATGA88790408GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Parambassis ranga genome assembly, chromosome: 22.
LR131973.1:14496286-14496305
TAAGGTTCATGTAAAGAACAGCTATGAAGT14496286GCAGAGACAGAAGGTGGAGGTTAATGTTTAACTGAAACCAGAGAATCTGC
Carassius carassius genome assembly, chromosome: 18.
OY720485.1:26932980-26932999
GAAACTGAAGAGCATGGAGCTTGCAGAGAT26932980GCAGAGACAGAAGGTGGAGGAGAGCAAAGCTGAAGACCAGTGCGAGTTCC
WO 2004078970-A/2: Branched-chain neutral amino acid transporter which functions in the single molecule.
DD050211.1:1285-1304
GACTGGTGGCAAGGAACGTGAGACAAATGA1285GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
KR 1020057016478-A/3: BRANCHED NEUTRAL AMINO ACID TRANSPORTERS ACTING AS SINGLEMOLECULE.
DI096432.1:1285-1304
GACTGGTGGCAAGGAACGTGAGACAAATGA1285GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
JP 2010252796-A/2: Branched-chain neutral amino acid transporter which functions in the single molecule.
FW576594.1:1285-1304
GACTGGTGGCAAGGAACGTGAGACAAATGA1285GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
Sequence 3 from patent US 7553642.
GP456818.1:1285-1304
GACTGGTGGCAAGGAACGTGAGACAAATGA1285GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Slc43a1:tm1a(EUCOMM)Hmgu; transgenic.
JN951810.1:26948-26967
TGTCTCTCCTCTACCCACAGAGACAAATGA26948GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
Mus musculus targeted non-conditional, lacZ-tagged mutant allele Slc43a1:tm1e(EUCOMM)Hmgu; transgenic.
JN959996.1:26889-26908
TGTCTCTCCTCTACCCACAGAGACAAATGA26889GCAGAGACAGAAGGTGGAGGAGACAGGTAGGGAGATGAAGGCACAGCCCC
vb72h11.r1 Soares mouse 3NME12 5 Mus musculus cDNA clone IMAGE:762597 5', mRNA sequence.
AA271141.1:307-326
GACTGGTGGCAAGGAACGTGAGACAAATGA307GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
Mus musculus cDNA, Abe mouse ES cell cDNA library, clone:19990616EK06G12.
AV581930.1:439-458
GACTGGTGGCAAGGAACGTGAGACAAATGA439GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
UI-M-BH3-arc-e-07-0-UI.r1 NIH_BMAP_M_S4 Mus musculus cDNA clone UI-M-BH3-arc-e-07-0-UI 5', mRNA sequence.
BM936380.1:183-202
GACTGGTGGCAAGGAACGTGAGACAAATGA183GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
AGENCOURT_8480486 NIH_MGC_129 Mus musculus cDNA clone IMAGE:6309874 5', mRNA sequence.
BQ715545.1:412-431
GACTGGTGGCAAGGAACGTGAGACAAATGA412GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
AGENCOURT_8712818 NIH_MGC_129 Mus musculus cDNA clone IMAGE:6307343 5', mRNA sequence.
BQ889168.1:302-321
GACTGGTGGCAAGGAACGTGAGACAAATGA302GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
AGENCOURT_10013998 NCI_CGAP_Mam2 Mus musculus cDNA clone IMAGE:6486816 5', mRNA sequence.
BQ920512.1:20-39
AGGAACGTGAGACAAATGA20GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
AGENCOURT_10104985 NIH_MGC_134 Mus musculus cDNA clone IMAGE:6511717 5', mRNA sequence.
BU515063.1:109-128
GACTGGTGGCAAGGAACGTGAGACAAATGA109GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
TSA: Raphanus sativus var. sativus RNA, contig: WG3_8436.
FX661535.1:903-922
TGCTGTGATGGAGCATTATTATTACTGGTT903GCAGAGACAGAAGGTGGAGGAGGAGGAGGAGGCATAGGCATTGGTTGTTG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_45105.
FX792175.1:895-914
GGCTGCTGTGATGGAGCATTATTACTGGTT895GCAGAGACAGAAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGCATTGGTTG
Mus musculus POV1 gene, VIRTUAL TRANSCRIPT, partial sequence, genomic survey sequence.
AY417254.1:121-140
GACTGGTGGCAAGGAACGTGAGACAAATGA121GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
BOIFR94TR BO_1.4_1.6_KB_nuc Brassica oleracea genomic clone BOIFR94, genomic survey sequence.
CC967716.1:592-611
AAACGAGGCTGTGATGGAGCATTACTGGTT592GCAGAGACAGAAGGTGGAGGAGGCAGAGGCATAGGCATAGGCATTGGCTG
Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610016F07 product:prostate cancer overexpressed gene 1, full insert sequence.
AK011417.1:1314-1333
GACTGGTGGCAAGGAACGTGAGACAAATGA1314GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930430D04 product:prostate cancer overexpressed gene 1, full insert sequence.
AK031215.1:1258-1277
GACTGGTGGCAAGGAACGTGAGACAAATGA1258GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
Mus musculus 4 days neonate thymus cDNA, RIKEN full-length enriched library, clone:B630013A07 product:solute carrier family 43, member 1, full insert sequence.
AK046758.1:1308-1327
GACTGGTGGCAAGGAACGTGAGACAAATGA1308GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430203O15 product:solute carrier family 43, member 1, full insert sequence.
AK165374.1:1308-1327
GACTGGTGGCAAGGAACGTGAGACAAATGA1308GCAGAGACAGAAGGTGGAGGAGACAGTTGAGTTCTACTCTTCCATCTTTG
Homo sapiens chromosome 11 clone RP11-204K20, WORKING DRAFT SEQUENCE, 20 unordered pieces.
AC073256.2:45583-45602
CAATAGGGGGTTTTCAGAGGAGAGGTGAGG45583GCAGAGACAGAAGGTGGAGGAGAAGAGAGGTGAGGATTGGGCAGTGGGCG
Homo sapiens chromosome 11 clone CTD-3110P2 map 11, WORKING DRAFT SEQUENCE, 5 unordered pieces.
AC090778.3:155377-155396
CAATAGGGGGTTTTCAGAGGAGAGGTGAGG155377GCAGAGACAGAAGGTGGAGGAGAAGAGAGGTGAGGATTGGGCAGTGGGCG
Homo sapiens genomic DNA, chromosome 11q13 clone:XXpac-662A14, WORKING DRAFT SEQUENCE, 29 unordered pieces.
AP000596.2:85769-85788
CAATAGGGGGTTTTCAGAGGAGAGGTGAGG85769GCAGAGACAGAAGGTGGAGGAGAAGAGAGGTGAGGATTGGGCAGTGGGCG
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:8113768-8113787
AAACGAGGCTGTGATGGAGCATTACTGGTT8113768GCAGAGACAGAAGGTGGAGGAGGAGGCATAGGCATAGACATTGATTGTTG
Raphanus sativus genome assembly, chromosome: 7.
OY743213.1:12337415-12337434
GGCTGCTGTGATGGAGCATTATTACTGGTT12337415GCAGAGACAGAAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGCATTGGTTG
Homo sapiens genomic DNA, chromosome 11q, clone:CTD-3110P2, complete sequences.
AP001880.4:14388-14407
CGCCCACTGCCCAATCCTCACCTCTCTTCT14388CCTCCACCTTCTGTCTCTGCCCTCACCTCTCCTCTGAAAACCCCCTATTG
Felis catus Senzu DNA, chromosome: C1, American Shorthair breed.
AP023159.1:2490616-2490635
CTACTCCTCCCCCAGCCCCTGTCAGCCACC2490616CCTCCACCTTCTGTCTCTGCGGACTTTCCTGTCCTAGACACTTCTTGTAA
Parambassis ranga genome assembly, chromosome: 19.
LR131969.1:17626357-17626376
AAGAAGGAGAAAGTCTTTCTGAAGCTCCCG17626357CCTCCACCTTCTGTCTCTGCACCTTCTGTCTCTTTCATTCTCGTATTCTG
Sequence 30 from patent US 5869640.
AR034838.1:210-229
CGCCCACTGCCCAATCCTCACCTCTCTTCT210CCTCCACCTTCTGTCTCTGCCCTCACCTCTCCTCTGAAAACCCCCTATTG
Eukaryotic synthetic construct chromosome 11.
CP034489.1:62950389-62950408
CGCCCACTGCCCAATCCTCACCTCTCTTCT62950389CCTCCACCTTCTGTCTCTGCCCTCACCTCTCCTCTGAAAACCCCCTATTG
BN15.022M23F020212 BN15 Brassica napus cDNA clone BN15022M23, mRNA sequence.
CD814342.1:407-426
ATGCAACAACAACAGCCAATGCCTATGCCT407CCTCCACCTTCTGTCTCTGCAACCAGTAATGCTCCATCACAGCCTCGTTT
oei66h02.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ027957.1:543-562
CAGCCAATGCCTATGCCTATGCCTCTGCCT543CCTCCACCTTCTGTCTCTGCAACCAGTAATGCTCCATCACAGCCTCGTTT
Brassica napus cultivar Xiang5A chromosome 12.
CP123887.1:42411875-42411894
ATGCAACAACAACAGCCAATGCCTATGCCT42411875CCTCCACCTTCTGTCTCTGCAACCAGTAATGCTCCATCACAGCCTCGTTT
Digitaria exilis genome assembly, chromosome: 7B.
LR994617.1:2441970-2441989
CCTTTTATTTTTCCTTTGTTGTCCCTTCTT2441970CCTCCACCTTCTGTCTCTGCTTCACGCCAACACACCCCGATGCCTCCACC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAGAGACAGAAGGTGGAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGAGACAGAAGGTGGAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.384 | 0.375 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGAGACAGAAGGTGGAGG&k=0&no_gap=0&offset=0&limit=50
0.581 | 0.197 | search_minus_done; http://172.18.8.135:50400/match?q=CCTCCACCTTCTGTCTCTGC&k=0&no_gap=0&offset=0&limit=1
0.587 | 0.006 | cgi_end;

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