GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-02-25 14:54:19, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:12297091-12297111
AATAATGATTTTGTGCTTGTTACATTGCAT12297091GCAGCCACCCCACCACAAAATCATTCAAAGTTTTGAGAGGACAGATTTTGG
Prunus speciosa IZO01 DNA, chromosome 5, sequence.
AP029593.1:20747363-20747383
AATAATGTTTTTGAGTTTGTTACATTGCAT20747363GCAGCCACCCCACCACAAAATCATTCAAAGTTTTGAGAGGACAGATTTTGG
Prunus speciosa IZO01 DNA, chromosome 5.
AP038359.1:19893916-19893936
AATAATGTTTTTGAGTTTGTTACATTGCAT19893916GCAGCCACCCCACCACAAAATCATTCAAAGTTTTGAGAGGACAGATTTTGG
Prunus speciosa IZO01 DNA, chromosome 5.
AP038367.1:20651784-20651804
AATAATGTTTTTGAGTTTGTTACATTGCAT20651784GCAGCCACCCCACCACAAAATCATTCAAAGTTTTGAGAGGACAGATTTTGG
Prunus dulcis genome assembly, chromosome: 5.
OZ022201.1:16074798-16074818
AATAATGATTTTGTGCTTGTTACATTGCAT16074798GCAGCCACCCCACCACAAAATCATTCAAAGTTTTGAGAGGACAGATTTTGG
Prunus dulcis genome assembly, chromosome: 5.
OZ022210.1:16430973-16430993
AATAATGATTTTGTGCTTGTTACATTGCAT16430973GCAGCCACCCCACCACAAAATCATTCAAAGTTTTGAGAGGACAGATTTTGG
Prunus armeniaca genome assembly, chromosome: 5.
OZ046364.2:13154116-13154136
CAAATATTAATAATGTTTGTTACATTGCAT13154116GCAGCCACCCCACCACAAAATCATTCAAAGTTTTGAGAGGACAGATTTTGG
Prunus armeniaca genome assembly, chromosome: 5.
OZ177841.1:12645730-12645750
CAAATATTAATAATGTTTGTTACATTGCAT12645730GCAGCCACCCCACCACAAAATCATTCAAAGTTTTGAGAGGACAGATTTTGG
Prunus padus genome assembly, chromosome: 16.
OZ060526.1:5559651-5559671
CCAAAATCTGTCCTCACAAAACTTTGAATG5559651ATTTTGTGGTGGGGTGGCTGCGTGCAATGTAAACGTTATTAATATTTGATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAGCCACCCCACCACAAAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGCCACCCCACCACAAAAT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.116 | 0.107 | search_plus_done; http://172.18.8.135:50800/match?q=GCAGCCACCCCACCACAAAAT&k=0&no_gap=0&offset=0&limit=50
0.152 | 0.035 | search_minus_done; http://172.18.8.135:50800/match?q=ATTTTGTGGTGGGGTGGCTGC&k=0&no_gap=0&offset=0&limit=42
0.153 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).