GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-20 07:52:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

MTGland_B046_2007-06-23/MtGland_B046_E01_004_1 Medicago truncatula A17 glandular trichome Medicago truncatula cDNA, mRNA sequence.
EX533190.1:305-329
GCTTGTTGTAGAAGTGGAATCAAAGATTTT305GCAGCTTGTTCCGGATCATTTGCATATGAACTCAAACCAGGTGTTATCTACAACA
N210666e MHAM Medicago truncatula/Glomus versiforme mixed EST library cDNA clone MHAM-2P11, mRNA sequence.
AW584590.1:332-356
TTAATAAGATAACACCTGGTTTGAGTTCAT332ATGCAAATGATCCGGAACAAGCTGCAAAATCTTTGATTCCACTTCTACAACAAGC
EST486173 MHAM Medicago truncatula/Glomus versiforme mixed EST library cDNA clone pMHAM-15D7 5' end, mRNA sequence.
BG584413.1:262-286
TTAATAAGATAACACCTGGTTTGAGTTCAT262ATGCAAATGATCCGGAACAAGCTGCAAAATCTTTGATTCCACTTCTACAACAAGC
MTNAL80TKM KVKC Medicago truncatula cDNA clone pKVKC-12G8, mRNA sequence.
BQ255419.1:338-362
TTAATAAGATAACACCTGGTTTGAGTTCAT338ATGCAAATGATCCGGAACAAGCTGCAAAATCTTTGATTCCACTTCTACAACAAGC
s13dNF42B01MJ009_244282 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX529112.1:308-332
TTAATAAGATAACACCTGGTTTGAGTTCAT308ATGCAAATGATCCGGAACAAGCTGCAAAATCTTTGATTCCACTTCTACAACAAGC
MHAM15C_B04_T3_029.seq MHAM2 Medicago truncatula/Glomus versiforme mixed EST library cDNA, mRNA sequence.
CX549288.1:266-290
TTAATAAGATAACACCTGGTTTGAGTTCAT266ATGCAAATGATCCGGAACAAGCTGCAAAATCTTTGATTCCACTTCTACAACAAGC
METAN53TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
EY476093.1:338-362
TTAATAAGATAACACCTGGTTTGAGTTCAT338ATGCAAATGATCCGGAACAAGCTGCAAAATCTTTGATTCCACTTCTACAACAAGC
Genomic sequence for Medicago truncatula, clone MTABa0052G10, complete sequence.
AC123593.1:77340-77364
TGTTGTAGATAACACCTGGTTTGAGTTCAT77340ATGCAAATGATCCGGAACAAGCTGCAAAATCTTTGATTCCACTTCTACAACAAGC
Medicago truncatula apyrase-like protein (APY1;1) mRNA, complete cds.
AY180377.1:320-344
TTAATAAGATAACACCTGGTTTGAGTTCAT320ATGCAAATGATCCGGAACAAGCTGCAAAATCTTTGATTCCACTTCTACAACAAGC
Medicago truncatula clone JCVI-FLMt-18A8 unknown mRNA.
BT149149.1:338-362
TTAATAAGATAACACCTGGTTTGAGTTCAT338ATGCAAATGATCCGGAACAAGCTGCAAAATCTTTGATTCCACTTCTACAACAAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCAGCTTGTTCCGGATCATTTGCAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGCTTGTTCCGGATCATTTGCAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.177 | 0.168 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGCTTGTTCCGGATCATTTGCAT&k=0&no_gap=0&offset=0&limit=50
0.433 | 0.257 | search_minus_done; http://172.18.8.135:50400/match?q=ATGCAAATGATCCGGAACAAGCTGC&k=0&no_gap=0&offset=0&limit=49
0.439 | 0.006 | cgi_end;

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