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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-06 11:50:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Cinclus cinclus genome assembly, chromosome: 3.
OY759679.1:58637726-58637745
GCATTTGATTGCAGCAACTGAAATGAATGA58637726GCAGTAACACCAGTGTAGATTGAATCAATGTTTTTAGAAATTGCAGAGAG
RTCA1_20_H12.b1_A029 Roots minus calcium Pinus taeda cDNA clone RTCA1_20_H12_A029 3', mRNA sequence.
DR054916.1:536-555
CAAATGCAATGAGATGAAGCACTACAAGAA536GCAGTAACACCAGTGTAGATGGCTTTCCATCTGCCATTTCTGCAACAGTA
WS02911.CR_G01 SS-IB-A-FL-15 Picea sitchensis cDNA clone WS02911_G01 3, mRNA sequence.
DR489264.1:805-824
CGAACGCCATGAGATGCAGCGCTACAAGAA805GCAGTAACACCAGTGTAGATG
WS00837.B21.1_J11 WS-X-N-A-9 Picea glauca cDNA clone WS00837_J11 3, mRNA sequence.
DR593287.1:813-832
CGAACGCAATGAGATGCAGCGCTACAAGAA813GCAGTAACACCAGTGTAGATGGCTTTCCGTCTGCCATTTCTGCAACAGAA
PBA011.CR_M02 Pba01-Bark-wounded-Norm (PBA01) Pinus banksiana cDNA clone PBA011_M02 3', mRNA sequence.
GW745319.1:761-780
CAAATGCAATGAGATGAAGCACTACAAGAA761GCAGTAACACCAGTGTAGATGGCTTTCCATCTGCCATTTCTGCAACAGTA
PBA0116.CR_K22 Pba01-Bark-wounded-Norm (PBA01) Pinus banksiana cDNA clone PBA0116_K22 3', mRNA sequence.
GW749126.1:809-828
CAAATGCAATGAGATGAAGCACTACAAGAA809GCAGTAACACCAGTGTAGATGGCTTTCCATCTGCCATTTCTGCAACAGTA
PBA0118.CR_H08 Pba01-Bark-wounded-Norm (PBA01) Pinus banksiana cDNA clone PBA0118_H08 3', mRNA sequence.
GW750476.1:816-835
CAAATGCAATGAGATGAAGCACTACAAGAA816GCAGTAACACCAGTGTAGATGGCTTTCCATCTGCCATTTCTGCAACAGTA
Pinus elliottii PEC37 mRNA, partial sequence.
U55013.1:44-63
CAAATGCAATGAGATGAAGCACTACAAGAA44GCAGTAACACCAGTGTAGATGGCTTTCCATCTGCCATTTCTGCAACAGTA
Eupithecia dodoneata genome assembly, chromosome: 4.
OX345659.1:13229679-13229698
CAACATGTGGAAACTGAAATTATTTCCTCT13229679GCAGTAACACCAGTGTAGATTGGTAATTGATGAGATTTATGAAGAAAATA
Pinus pinaster shoot EST, clone AN06A04 similar to PEC37.
AL749678.1:161-180
TACTGTTGCAGAAATGGCAGATGGAAAACC161ATCTACACTGGTGTTACTGCTTCTTGTAGTGCTTCATCTCATTGCATTTG
NXCI_118_F06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_118_F06 5' similar to Arabidopsis thaliana sequence At1g13380 unknown protein see http://mips.gsf.de/proj/thal/db/
BF060635.1:111-130
TACTGTTGCAGAAATGGCAGATGGAAAGCC111ATCTACACTGGTGTTACTGCTTCTTGTAGTGCTTCATCTCATTGCATTTG
NXSI_082_A03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_082_A03 5' similar to Arabidopsis thaliana sequence At1g13380 unknown protein see http://mips.gsf.de/proj/thal/db/index.h
BF778231.1:36-55
TACTGTTGCAGAAATGGCAGATGGAAAGCC36ATCTACACTGGTGTTACTGCTTCTTGTAGTGCTTCATCTCATTGCATTTG
Pinus pinaster xylem EST, clone PP091H10.
BX253995.1:91-110
TACTGTTGCAGAAATGGCAGATGGAAAACC91ATCTACACTGGTGTTACTGCTTCTTGTAGTGCTTCATCTCATTGCATTTG
NXSI_075_H04_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_075_H04 5', mRNA sequence.
CD025718.1:90-109
TACTGTTGCAGAAATGGCAGATGGAAAGCC90ATCTACACTGGTGTTACTGCTTCTTGTAGTGCTTCATCTCATTGCATTTG
WS0072.B21_J01 WS-PS-N-A-8 Picea glauca cDNA clone WS0072_J01 3', mRNA sequence.
CO237404.1:122-141
TTCTGTTGCAGAAATGGCAGACGGAAAGCC122ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
WS00725.B21_J14 WS-PS-N-A-8 Picea glauca cDNA clone WS00725_J14 3', mRNA sequence.
CO239384.1:122-141
TTCTGTTGCAGAAATGGCAGACGGAAAGCC122ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
COLD1_32_B03.g1_A029 Root cold Pinus taeda cDNA clone COLD1_32_B03_A029 5', mRNA sequence.
CX649030.1:124-143
TACTGTTGCAGAAATGGCAGATGGAAAGCC124ATCTACACTGGTGTTACTGCTTCTTGTAGTGCTTCATCTCATTGCATTTG
RTDK1_21_F04.b1_A029 Roots, dark Pinus taeda cDNA clone RTDK1_21_F04_A029 3', mRNA sequence.
DR071646.1:60-79
TACTGTTGCAGAAATGGCAGATGGAAAGCC60ATCTACACTGGTGTTACTGCTTCTTGTAGTGCTTCATCTCATTGCATTTG
RTFEPL1_20_C04.b1_A029 Roots plus added iron Pinus taeda cDNA clone RTFEPL1_20_C04_A029 3', mRNA sequence.
DR080076.1:17-36
TGGCAGATGGAAAGCC17ATCTACACTGGTGTTACTGCTTCTTGTAGTGCTTCATCTCATTGCATTTG
RTFEPL1_20_C04.g1_A029 Roots plus added iron Pinus taeda cDNA clone RTFEPL1_20_C04_A029 5', mRNA sequence.
DR080140.1:91-110
TACTGTTGCAGAAATGGCAGATGGAAAGCC91ATCTACACTGGTGTTACTGCTTCTTGTAGTGCTTCATCTCATTGCATTTG
WS0282.B21_E10 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS0282_E10 5, mRNA sequence.
DR485772.1:213-232
TTCTGTTGCAGAAATGGCAGACGGAAAGCC213ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
WS02911.C21_G01 SS-IB-A-FL-15 Picea sitchensis cDNA clone WS02911_G01 5, mRNA sequence.
DR496947.1:210-229
TTCTGTTGCAGAAATGGCAGACGGAAAGCC210ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
WS02713.C21_C03 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02713_C03 5, mRNA sequence.
DR522930.1:217-236
TTCTGTTGCAGAAATGGCAGACGGAAAGCC217ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
WS02717.B21_C01 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02717_C01 5, mRNA sequence.
DR524381.1:146-165
TTCTGTTGCAGAAATGGCAGACGGAAAGCC146ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
WS03732.C21_B15 SS-B-N-22 Picea sitchensis cDNA clone WS03732_B15 3', mRNA sequence.
ES257429.1:128-147
TTCTGTTGCAGAAATGGCAGACGGAAAGCC128ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
WS02791.CR_C12 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02791_C12 3', mRNA sequence.
ES864922.1:21-40
GAAATGGCAGACGGAAAGCC21ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
WS02838.CR_D17 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02838_D17 3', mRNA sequence.
ES872455.1:103-122
TTCTGTTGCAGAAATGGCAGACGGAAAGCC103ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
WS02927.CR_F07 SS-IB-A-FL-15 Picea sitchensis cDNA clone WS02927_F07 3', mRNA sequence.
ES875910.1:47-66
TTCTGTTGCAGAAATGGCAGACGGAAAGCC47ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ02814.B7_M03 GQ028 - Cambium / phloem scrappings (Normalized library) Picea glauca cDNA clone GQ02814_M03 5', mRNA sequence.
EX319228.1:116-135
TTCTGTTGCAGAAATGGCAGACGGAAAGCC116ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ02830.B7_I07 GQ028 - Cambium / phloem scrappings (Normalized library) Picea glauca cDNA clone GQ02830_I07 5', mRNA sequence.
EX329616.1:92-111
TTCTGTTGCAGAAATGGCAGACGGAAAGCC92ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03107.B7_H20 GQ031 - Xylem Scrapings (Normalized library) Picea glauca cDNA clone GQ03107_H20 5', mRNA sequence.
EX349327.1:210-229
TTCTGTTGCAGAAATGGCAGACGGAAAGCC210ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03113.B7_D15 GQ031 - Xylem Scrapings (Normalized library) Picea glauca cDNA clone GQ03113_D15 5', mRNA sequence.
EX353593.1:132-151
TTCTGTTGCAGAAATGGCAGACGGAAAGCC132ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03121.B7_A08 GQ031 - Xylem Scrapings (Normalized library) Picea glauca cDNA clone GQ03121_A08 5', mRNA sequence.
EX356809.1:76-95
TTCTGTTGCAGAAATGGCAGACGGAAAGCC76ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03231.B7.1_I24 GQ032 - Shoot tip (Normalized library) Picea glauca cDNA clone GQ03231_I24 5', mRNA sequence.
EX375205.1:132-151
TTCTGTTGCAAAAATGGCAGACGGAAAGCC132ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03231.B7_I24 GQ032 - Shoot tip (Normalized library) Picea glauca cDNA clone GQ03231_I24 5', mRNA sequence.
EX375568.1:132-151
TTCTGTTGCAAAAATGGCAGACGGAAAGCC132ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03233.B7.1_J22 GQ032 - Shoot tip (Normalized library) Picea glauca cDNA clone GQ03233_J22 5', mRNA sequence.
EX376690.1:148-167
TTCTGTTGCAGAAATGGCAGACGGAAAGCC148ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03233.B7_J22 GQ032 - Shoot tip (Normalized library) Picea glauca cDNA clone GQ03233_J22 5', mRNA sequence.
EX377057.1:148-167
TTCTGTTGCAGAAATGGCAGACGGAAAGCC148ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03235.B7_J04 GQ032 - Shoot tip (Normalized library) Picea glauca cDNA clone GQ03235_J04 5', mRNA sequence.
EX377767.1:203-222
TTCTGTTGCAGAAATGGCAGACGGAAAGCC203ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03301.B7_E06 GQ033 - Terminal leader (Normalized library) Picea glauca cDNA clone GQ03301_E06 5', mRNA sequence.
EX379836.1:167-186
TTCTGTTGCAGAAATGGCAGACGGAAAGCC167ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03317.B7_N22 GQ033 - Terminal leader (Normalized library) Picea glauca cDNA clone GQ03317_N22 5', mRNA sequence.
EX390660.1:132-151
TTCTGTTGCAGAAATGGCAGACGGAAAGCC132ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03705.B7_H02 GQ037 - Shoot tip - Dormant Picea glauca cDNA clone GQ03705_H02 5', mRNA sequence.
EX416554.1:132-151
TTCTGTTGCAGAAATGGCAGACGGAAAGCC132ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03707.B7_G05 GQ037 - Shoot tip - Dormant Picea glauca cDNA clone GQ03707_G05 5', mRNA sequence.
EX417273.1:132-151
TTCTGTTGCAGAAATGGCAGACGGAAAGCC132ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03714.B7_L18 GQ037 - Shoot tip - Dormant Picea glauca cDNA clone GQ03714_L18 5', mRNA sequence.
EX419997.1:166-185
TTCTGTTGCAGAAATGGCAGACGGAAAGCC166ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ03914.B7_F04 GQ039 - Stem - Dormant Picea glauca cDNA clone GQ03914_F04 5', mRNA sequence.
EX433792.1:157-176
TTCTGTTGCAGGAATGGCAGACGGAAAGCC157ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
GQ04005.B7_M05 GQ040 - Shoot tip - Active growth (Normalized) Picea glauca cDNA clone GQ04005_M05 5', mRNA sequence.
EX437633.1:174-193
TTCTGTTGCAGAAATGGCAGACGGAAAGCC174ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
WS0443.C21_G19 SS-BD-29 Picea sitchensis cDNA clone WS0443_G19 5', mRNA sequence.
GH281569.1:92-111
TTCTGTTGCAGAAATGGCAGACGGAAAGCC92ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
PCO0132.C21_C15 Pco01-Bark-Wounded-Norm (PCO01) Pinus contorta cDNA clone PCO0132_C15 5', mRNA sequence.
GT234898.1:175-194
TACTGTTGCAGAAATGGCAGATGGAAAGCC175ATCTACACTGGTGTTACTGCTTCTTGTAGTGCTTCATCTCATTGCATTTG
PCO0132.CR_C15 Pco01-Bark-Wounded-Norm (PCO01) Pinus contorta cDNA clone PCO0132_C15 3', mRNA sequence.
GT235266.1:126-145
TACTGTTGCAGAAATGGCAGATGGAAAGCC126ATCTACACTGGTGTTACTGCTTCTTGTAGTGCTTCATCTCATTGCATTTG
PCO011.C21_O13 Pco01-Bark-Wounded-Norm (PCO01) Pinus contorta cDNA clone PCO011_O13 5', mRNA sequence.
GT242136.1:153-172
TACTGTTGCAGAAATGGCAGATGGAAAGCC153ATCTACACTGGTGTTACTGCTTCTTGTAGTGCTTCATCTCATTGCATTTG
PCO011.CR_O13 Pco01-Bark-Wounded-Norm (PCO01) Pinus contorta cDNA clone PCO011_O13 3', mRNA sequence.
GT242497.1:64-83
TACTGTTGCAGAAATGGCAGATGGAAAGCC64ATCTACACTGGTGTTACTGCTTCTTGTAGTGCTTCATCTCATTGCATTTG
TSA: Abies alba contig16145.Aaseedling mRNA sequence.
JV153917.1:133-152
ACCTGTTGCTGAAATGGCGGACGGAAAGCC133ATCTACACTGGTGTTACTGCTTCTTGCAGCGCTTCATCTCATTTCATTCG
Picea glauca clone GQ03301_E06 mRNA sequence.
BT111609.1:167-186
TTCTGTTGCAGAAATGGCAGACGGAAAGCC167ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
Picea sitchensis clone WS02713_C03 unknown mRNA.
EF084154.1:214-233
TTCTGTTGCAGAAATGGCAGACGGAAAGCC214ATCTACACTGGTGTTACTGCTTCTTGTAGCGCTGCATCTCATTGCGTTCG
Eupithecia abbreviata genome assembly, chromosome: 5.
OX030978.1:724128-724147
TATTTTCATCATAAATATCATCAATCATCA724128ATCTACACTGGTGTTACTGCATAGGAAATAATTTCAGTTTCCATATGTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAGTAACACCAGTGTAGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGTAACACCAGTGTAGAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.934 | 0.926 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGTAACACCAGTGTAGAT&k=0&no_gap=0&offset=0&limit=50
3.654 | 2.719 | search_minus_done; http://172.18.8.135:50400/match?q=ATCTACACTGGTGTTACTGC&k=0&no_gap=0&offset=0&limit=41
3.682 | 0.029 | cgi_end;

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