GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-20 14:57:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Medicago truncatula chromosome 7 clone mth2-19e15, complete sequence.
AC149131.3:48091-48114
TTGTTTTTCATCCAACAGGTTCTTAGAAAT48091GCAGTAAGCAAAACATACAACCGTATTTCTGATCTAAGGAAAGAAATAACATCT
Trifolium repens isolate ACLI19 chromosome 07_0cc.
CP125848.1:17831160-17831183
TTGTTTTCCATCGAACAGGTCCTTAGAAAT17831160GCAGTAAGCAAAACATACAACCGTATTTCTGATCTAAGGAAAGAAATATTATCT
Trifolium repens isolate ACLI19 chromosome 07_Pall.
CP125849.1:18776387-18776410
TTGTTTTCCATCGAACAGGTCCTTAGAAAT18776387GCAGTAAGCAAAACATACAACCGTATTTCTGATCTAAGAAAAGAAATATTATCT
Medicago truncatula ABH1 mRNA, partial cds.
KM398981.1:1747-1770
ACAGATCGTCCATGGGAGGTTCTTAGAAAT1747GCAGTAAGCAAAACATACAACCGTATTTCTGATCTAAGGAAAGAAATAACATCT
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:18409289-18409312
TTGTTTTCCATTCAACAGGTCCTTAGAAAT18409289GCAGTAAGCAAAACATACAACCGTATTTCTGATCTAAGGAAAGAAATATTATCT
Medicago lupulina genome assembly, chromosome: 2.
OY283140.1:16300607-16300630
TTGTTTTTCATCCAACAGGTTCTTAGAAAT16300607GCAGTAAGCAAAACATACAACCGTATTTCTGATCTAAGGAAAGAAATAACATCT
Cicer arietinum chromosome Ca3.
CP039333.1:25635766-25635789
TGATGATATCTCTTTCCTTAGATCAGAAAT25635766ACGGTTGTATGTTTTGCTTACTGCATTTCTAAGAATCTGTTGCATGGAAAACAA
Cicer arietinum chromosome Ca3.
CP040768.1:25635766-25635789
TGATGATATCTCTTTCCTTAGATCAGAAAT25635766ACGGTTGTATGTTTTGCTTACTGCATTTCTAAGAATCTGTTGCATGGAAAACAA
Medicago arabica genome assembly, chromosome: 6.
OX326969.1:43504899-43504922
AGATGTTATTTCTTTCCTTAGATCAGAAAT43504899ACGGTTGTATGTTTTGCTTACTGCATTTCTAAGAACCTGTTGGATGAAAAACAA
Vicia faba genome assembly, chromosome: 5.
OX451740.1:521829047-521829070
AGATGATATTTCTTTCCTTAGATCAGAAAT521829047ACGGTTGTATGTTTTGCTTACTGCATTTCTAAGAACCTGTTGGATGGAAAACAA
Trifolium dubium genome assembly, chromosome: 4.
OX638065.1:40864840-40864863
AGATGATATTTCTTTCCTTAGATCAGAAAT40864840ACGGTTGTATGTTTTGCTTACTGCATTTCTAAGAACCTGTTGAATGGAAAACAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCAGTAAGCAAAACATACAACCGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGTAAGCAAAACATACAACCGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGTAAGCAAAACATACAACCGT&k=0&no_gap=0&offset=0&limit=50
0.125 | 0.022 | search_minus_done; http://172.18.8.135:50400/match?q=ACGGTTGTATGTTTTGCTTACTGC&k=0&no_gap=0&offset=0&limit=44
0.128 | 0.003 | cgi_end;

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