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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 14:37:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

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TSA: Cajanus cajan cultivar UPAS 120 contig26159.UPAS mRNA sequence.
EZ643876.1:69-91
TTGTGATTCTCAGATTGCTGATTTGCACAC69GCAGTTTGGCAGCTTCTTGCTGGTAAAACTGAGCATTAGCCTCAGAAGCAGAT
mte1-83K1RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR348804.1:228-250
TATGATTCTGCAAGTTACTGATTTGCACAC228GCAGTTTGGCAGCTTCTTGCTGGTAATACTGAAATTAAGCAATCATGTTTAAA
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC H096G20, *** SEQUENCING IN PROGRESS ***, 25 unordered pieces.
AC274018.1:113267-113289
TGTGATTCTGCAGATTGCTGATTTGAACTC113267GCAGTTTGGCAGCTTCTTGCTGGTAAAACTGAAATTATGAAATAATGGTTAGA
Medicago truncatula clone mth2-30e7, complete sequence.
AC137837.4:34139-34161
TATGATTCTGCAAGTTACTGATTTGCACAC34139GCAGTTTGGCAGCTTCTTGCTGGTAATACTGAAATTAAGCAATCATGTTTAAA
Lotus japonicus genomic DNA, chromosome 4, clone: LjT07K08, TM0046b.
AP004519.1:71150-71172
TGTGATTCTGCAGGTTACTGATTTGGACAC71150GCAGTTTGGCAGCTTCTTGCTGGTAAAACTGAGATTGTGCAATCATGGTTATT
Lotus japonicus genomic DNA, chromosome 4, clone: LjT41M05, TM0404.
AP006697.1:93956-93978
TGTGATTCTGCAGGTTACTGATTTGGACAC93956GCAGTTTGGCAGCTTCTTGCTGGTAAAACTGAGATTGTGCAATCATGGTTATT
Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
AP015034.1:9248357-9248379
TGTGATTCTGCAGATTGCTGATTTGAACTC9248357GCAGTTTGGCAGCTTCTTGCTGGTAAAACTGAAATTATGAAATAATGGTTAGA
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:9320959-9320981
TGTGATTCTGCAAATTACTGATTTGGACTC9320959GCAGTTTGGCAGCTTCTTGCTGGTAAAACTGAGATTAAGAAGTCATGTTTAAA
Lathyrus aphaca genome assembly, chromosome: 3.
OZ014521.1:69465968-69465990
TGTGATTCTGCGAATTACTGAATTGCAACC69465968GCAGTTTGGCAGCTTCTTGCTGGTAATACTGTGAGTAAGCAATCATGTTTAAA
Sequence 8590 from patent US 7960612.
GY266637.1:267-289
ATCCACTTCTGGGGCTAATGCTCAGTTTTA267CCAGCAAGAAGCTGCCAAACTGCGTGTCCAAATCAGTAACCTGCAGAATCACA
Sequence 13336 from patent US 8030546.
GY465561.1:267-289
ATCCACTTCTGGGGCTAATGCTCAGTTTTA267CCAGCAAGAAGCTGCCAAACTGCGTGTCCAAATCAGTAACCTGCAGAATCACA
Sequence 13336 from patent US 10597667.
MO976714.1:267-289
ATCCACTTCTGGGGCTAATGCTCAGTTTTA267CCAGCAAGAAGCTGCCAAACTGCGTGTCCAAATCAGTAACCTGCAGAATCACA
GLE054_C10_038 Cyamopsis tetragonoloba (L.) Taub seeds at early developmental stage Cyamopsis tetragonoloba cDNA, mRNA sequence.
EG986489.1:332-354
ATCTGCTTCAGAGGCTAATGCTCAGTTTTA332CCAGCAAGAAGCTGCCAAACTGCGAGTGCAGATCAGTAATCTGCAGAATCATA
GLE060_G06_018 Cyamopsis tetragonoloba (L.) Taub seeds at early developmental stage Cyamopsis tetragonoloba cDNA, mRNA sequence.
EG987157.1:366-388
ATCTGCTTCAGAGGCTAATGCTCAGTTTTA366CCAGCAAGAAGCTGCCAAACTGCGAGTGCAGATCAGTAATCTGCAGAATCATA
GLE089_H09_033 Cyamopsis tetragonoloba (L.) Taub seeds at early developmental stage Cyamopsis tetragonoloba cDNA, mRNA sequence.
EG990361.1:372-394
ATCTGCTTCAGAGGCTAATGCTCAGTTTTA372CCAGCAAGAAGCTGCCAAACTGCGAGTGCAGATCAGTAATCTGCAGAATCATA
CeSi_F5_T3_F03_021 Ceratonia siliqua flowers cDNA library Ceratonia siliqua cDNA clone CeSi_F5_F03_021, mRNA sequence.
FD381982.1:576-598
ATCTACTTCTGAGGCTAATGCTCAGTATTA576CCAGCAAGAAGCTGCCAAACTGCGTGGACAGATTAATAGCCTGCAGAACAGCA
454PCEP0059967 Scarlet Runner Bean globular-stage embryo-proper regions Phaseolus coccineus cDNA, mRNA sequence.
GD349810.1:22-44
GGGGGCTAATGCTCAGTTCTA22CCAGCAAGAAGCTGCCAAACTGCGAGTTCAAATTAGCAAT
TSA: Cajanus cajan cultivar Asha contig28567.Asha mRNA sequence.
EZ676431.1:331-353
ATCTGCTTCTGAGGCTAATGCTCAGTTTTA331CCAGCAAGAAGCTGCCAAACTGCGTGTGCAAATCAGCAATCTGCAGAATCACA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq2.
LA600798.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq3.
LA600799.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq4.
LA600800.1:364-386
TCTGTGTGAAATCAAATATTCCCAGTTCTA364CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq5.
LA600801.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq6.
LA600802.1:364-386
TCTGTGTGAAATCAAATATTCCCAGTTCTA364CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq8.
LA600804.1:364-386
TCTGTGTGAAATCAAATATTCCCAGTTCTA364CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq9.
LA600805.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq10.
LA600806.1:364-386
TCTGTGTGAAATCAAATATTCCCAGTTCTA364CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq11.
LA600807.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq13.
LA600809.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq14.
LA600810.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq16.
LA600812.1:364-386
TCTGTGTGAAATCAAATATTCCCAGTTCTA364CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq18.
LA600814.1:364-386
TCTGTGTGAAATCAAATATTCCCAGTTCTA364CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq20.
LA600816.1:364-386
TCTGTGTGAAATCAAATATTCCCAGTTCTA364CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq21.
LA600817.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq23.
LA600819.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq25.
LA600820.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq31.
LA600826.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq32.
LA600827.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq33.
LA600828.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq35.
LA600830.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq36.
LA600831.1:364-386
TCTGTGTGAAATCAAATATTCCCAGTTCTA364CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq37.
LA600832.1:364-386
TCTGTGTGAAATCAAATATTCCCAGTTCTA364CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq39.
LA600834.1:504-526
ATCAGTTTCTGAAACTAATGCTCAGTTCTA504CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq44.
LA600839.1:364-386
TCTGTGTGAAATCAAATATTCCCAGTTCTA364CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp293883_c0_seq45.
LA600840.1:364-386
TCTGTGTGAAATCAAATATTCCCAGTTCTA364CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
mte1-51B1RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR324355.1:335-357
TTTAAACATGATTGCTTAATTTCAGTATTA335CCAGCAAGAAGCTGCCAAACTGCGTGTGCAAATCAGTAACTTGCAGAATCATA
Medicago truncatula clone mth2-76i7, complete sequence.
AC153460.24:84914-84936
TTTAAACATGATTGCTTAATTTCAGTATTA84914CCAGCAAGAAGCTGCCAAACTGCGTGTGCAAATCAGTAACTTGCAGAATCATA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:76076041-76076063
AATAACCATGATTGCACAATCTCAGTTTTA76076041CCAGCAAGAAGCTGCCAAACTGCGTGTCCAAATCAGTAACCTGCAGAATCACA
Lotus corniculatus var. japonicus MADS box protein AGb mRNA, partial cds.
AY770403.1:267-289
ATCCACTTCTGGGGCTAATGCTCAGTTTTA267CCAGCAAGAAGCTGCCAAACTGCGTGTCCAAATCAGTAACCTGCAGAATCACA
Vigna unguiculata cultivar Xiabao 2 chromosome Vu03.
CP039346.1:72727280-72727302
TCTAACCATTATTTCATAATTTCAGTTTTA72727280CCAGCAAGAAGCTGCCAAACTGCGAGTTCAAATCAGCAATCTGCAGAATCACA
Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:55226853-55226875
TTTAAATATGACATCTTAATCTCAGTATTA55226853CCAGCAAGAAGCTGCCAAACTGCGAGTCCAAATCAGTAATTTGCAGAATCACA
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:50817877-50817899
TTTAAACATGACTTCTTATTCTCAGTTTTA50817877CCAGCAAGAAGCTGCCAAACTGCGAGTCCAAATCAGTAATTTGCAGAATCACA
Kerria japonica AGAMOUS-like MADS-box protein (AG) mRNA, complete cds.
KC476500.1:405-427
ATCTGTTTCCGAAGCTAGTACTCAGTACTA405CCAGCAAGAAGCTGCCAAACTGCGTGCTCAGATTGGGAATTTGCAGAACTCAA
Medicago truncatula cultivar Jemalong A17 MADS-box transcription factor AGAMOUSb (AGb) mRNA, complete cds.
KF159805.1:364-386
ATCAGCTTCTGAGTCTAATGTTCAGTATTA364CCAGCAAGAAGCTGCCAAACTGCGTGTGCAAATCAGTAACTTGCAGAATCATA
Medicago truncatula AGAMOUSb (AGb) gene, complete cds.
KJ470634.1:3482-3504
TTTAAACATGATTGCTTAATTTCAGTATTA3482CCAGCAAGAAGCTGCCAAACTGCGTGTGCAAATCAGTAACTTGCAGAATCATA
Kerria japonica var. pleniflora AGAMOUS-like MADS-box protein gene, complete cds; and insertion sequence, complete sequence.
KT884659.1:8042-8064
ATTGGTTTATGGATGCAAATTTCAGTACTA8042CCAGCAAGAAGCTGCCAAACTGCGTGCTCAGATTGGGAATTTGCAGAACTCAA
Kerria japonica AGAMOUS-like MADS-box protein gene, complete cds.
KT884660.1:5586-5608
ATTGGTTTATGGATGCAAATTTCAGTACTA5586CCAGCAAGAAGCTGCCAAACTGCGTGCTCAGATTGGGAATTTGCAGAACTCAA
Medicago arabica genome assembly, chromosome: 1.
OX326964.1:61684770-61684792
TTTAAACATGATTGCTTAATTTCAGTATTA61684770CCAGCAAGAAGCTGCCAAACTGCGTGTGCAAATCAGTAACTTGCAGAATCATA
Ailanthus altissima genome assembly, chromosome: 8.
OX327690.1:27333741-27333763
TCCACTTCCATGGACATGATCTCAGTTCTA27333741CCAGCAAGAAGCTGCCAAACTGCGGACTCAAATTAACAATCTACAACATACAA
Humulus lupulus genome assembly, chromosome: 9.
OY720656.1:4435711-4435733
TCTGTGTGAAATCAAATATTCCCAGTTCTA4435711CCAGCAAGAAGCTGCCAAACTGCGTGGTCAAATTGAGTCTTTGCATAAAGGAA
Dryas octopetala genome assembly, chromosome: 1.
OY992832.1:6415888-6415910
TTGCTTTAATGGATATGAATCTCAGTACTA6415888CCAGCAAGAAGCTGCCAAACTGCGTGCTCAGATCGGGAATTTGCAGAACTCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAGTTTGGCAGCTTCTTGCTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGTTTGGCAGCTTCTTGCTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.197 | 0.188 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGTTTGGCAGCTTCTTGCTGG&k=0&no_gap=0&offset=0&limit=50
1.279 | 1.082 | search_minus_done; http://172.18.8.135:50400/match?q=CCAGCAAGAAGCTGCCAAACTGC&k=0&no_gap=0&offset=0&limit=41
1.312 | 0.033 | cgi_end;

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