GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 15:01:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium pratense cDNA clone:RCE02964.
BB904956.1:71-92
CTTTTGCTCTAAAAGCTGTTGTTGAGCTAC71GCATAGCGGACATAATAGACCGCTATGGTAAGCCACTATCCTTAACTCAAAT
Trifolium repens mRNA, clone: WCC02a20_017, unspecified EST.
FY454967.1:218-239
CTTTTGCTTTAAAAGCTGTTGTTGAGTTAC218GCATAGCGGACATAATAGACCGCTATGGTAAGCCACTATCCTTAACTCAAAT
Trifolium repens mRNA, clone: WCC03j14_022, unspecified EST.
FY455263.1:236-257
CTTTTGCTTTAAAAGCTGTTGTTGAGTTAC236GCATAGCGGACATAATAGACCGCTATGGTAAGCCACTATCCTTAACTCAAAT
Trifolium repens mRNA, clone: WCC03l08_030, unspecified EST.
FY455287.1:241-262
CTTTTGCTTTAAAAGCTGTTGTTGAGCTAC241GCATAGCGGACATAATAGACCGCTATGGTAAGCCACTATCCTTAACTCAAAT
Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:8481002-8481023
CTTTTGCTTTAAAAGCTGTTGTTGAGCTAC8481002GCATAGCGGACATAATAGACCGCTATGGTAAGCCACTATCCTTAACTCAAAT
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:8990014-8990035
CTTTTGCTTTAAAAGCTGTTGTTGAGTTAC8990014GCATAGCGGACATAATAGACCGCTATGGTAAGCCACTATCCTTAACTCAAAT
Trifolium subterraneum genome assembly, chromosome: 5.
OX637465.1:46555672-46555693
ATTTGAGTTAAGGATAGTGGCTTACCATAG46555672CGGTCTATTATGTCCGCTATGCGTAGCTCAACGACAGCTTTTAGAGCAAAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCATAGCGGACATAATAGACCG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCATAGCGGACATAATAGACCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.356 | 0.347 | search_plus_done; http://172.18.8.135:50400/match?q=GCATAGCGGACATAATAGACCG&k=0&no_gap=0&offset=0&limit=50
0.387 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=CGGTCTATTATGTCCGCTATGC&k=0&no_gap=0&offset=0&limit=44
0.387 | 0.001 | cgi_end;

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