GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-20 21:41:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

LupBES_07032 Narrow-leafed lupin BAC-end sequences Lupinus angustifolius genomic, genomic survey sequence.
JS571639.1:564-587
CTTCATAACTTATGAACAGCTAGTTACCTA564GCATCACGAAATCCTGTCAATGCTAAATAAAGAGTTCGAGGTATAGGGGGTTGC
Medicago lupulina genome assembly, chromosome: 2.
OY283140.1:15915606-15915629
TTTGTAATTTTTCGGAAGGACTTTTACCTA15915606GCATCACGAAATCCTGTCAATGCTAAATAAAGAGTCCGTGGTATAGGTGTCGCA
NF055F05IN1F1045 Insect herbivory Medicago truncatula cDNA clone NF055F05IN 5', mRNA sequence.
BG449665.1:163-186
TGCAACGCCTATACCACGGACTCTTTATTT163AGCATTGACAGGATTTCGTGATGCTAGTTTAATTTCAACTCCACCTCCAGAAAG
s13dNF28B10AT089_509934 Aphid-Infected Shoots Medicago truncatula cDNA, mRNA sequence.
CX526095.1:317-340
TGCAACGCCTATACCACGGACTCTTTATTT317AGCATTGACAGGATTTCGTGATGCTAGTTTAATTTCAACTCCACCTCCAGAAAG
Medicago truncatula chromosome 7 clone mte1-17h9, complete sequence.
AC157890.2:1693-1716
TGCAACGCCTATACCACGGACTCTTTATTT1693AGCATTGACAGGATTTCGTGATGCTAGGTAAAAGCCCTTCCACAAATTACGAAG
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-10.
CP023122.1:7224750-7224773
TGCAACCCCTATACCTCGAACTCTTTATTT7224750AGCATTGACAGGATTTCGTGATGCTAGGTAACTAGCTGTTCATAAGTTATGAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCATCACGAAATCCTGTCAATGCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCATCACGAAATCCTGTCAATGCT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.132 | 0.123 | search_plus_done; http://172.18.8.135:50400/match?q=GCATCACGAAATCCTGTCAATGCT&k=0&no_gap=0&offset=0&limit=50
0.218 | 0.086 | search_minus_done; http://172.18.8.135:50400/match?q=AGCATTGACAGGATTTCGTGATGC&k=0&no_gap=0&offset=0&limit=48
0.221 | 0.003 | cgi_end;

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