GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 07:22:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Capsicum annuum MGMT_Contig23245, mRNA sequence.
JW073489.1:2625-2644
ATCCCAACTCCTTCACCACCTCGTAATTCT2625GCATCGTAGCGCCTTTCTACACCAGCTAGCTAGTACTCCTTGCTTAATTA
KS23001A04 KS23 Capsicum annuum cDNA, mRNA sequence.
GD111026.1:282-301
TAATTAAGCAAGGAGTACTAGCTAGCTGGT282GTAGAAAGGCGCTACGATGCAGAATTACGAGGTGGTGAAGGAGTTGGGAT
KS24043G04 KS24 Capsicum annuum cDNA, mRNA sequence.
GD121888.1:269-288
TAATTAAGCAAGGAGTACTAGCTAGCTGGT269GTAGAAAGGCGCTACGATGCAGAATTACGAGGTGGTGAAGGAGTTGGGAT
Capsicum annuum Takanotsume DNA, chromosome 12, sequence.
AP026707.1:1537464-1537483
TAATTAAGCAAGGAGTACTAGCTAGCTGGT1537464GTAGAAAGGCGCTACGATGCAGAATTACGAGGTGGTGAAGGAGTTGGGAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 12.
CP124720.1:262288255-262288274
TAATTAAGCAAGGAGTACTAGCTAGCTGGT262288255GTAGAAAGGCGCTACGATGCAGAATTACGAGGTGGTGAAGGAGTTGGGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCATCGTAGCGCCTTTCTAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCATCGTAGCGCCTTTCTAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.114 | 0.105 | search_plus_done; http://172.18.8.135:50400/match?q=GCATCGTAGCGCCTTTCTAC&k=0&no_gap=0&offset=0&limit=50
0.380 | 0.266 | search_minus_done; http://172.18.8.135:50400/match?q=GTAGAAAGGCGCTACGATGC&k=0&no_gap=0&offset=0&limit=49
0.382 | 0.003 | cgi_end;

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