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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 06:06:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Onychomys arenicola genome assembly, chromosome: 5.
OX460446.1:56548941-56548960
TCTGTGCTCTGTGTCTGGCTGGTGACTCCT56548941GCATCTCCACCGTTCTTCTCTCCAGCATCCTCTCTGCCCCGAAAATCCTG
Zeus faber genome assembly, chromosome: 17.
OY482861.1:15223471-15223490
GACGCGGCGCGGAACATGAGACACGGGGAG15223471GCATCTCCACCGTTCTTCTCGGTTGAAGATTGTTTTGTACGTCACATACT
Trifolium pratense mRNA for hypothetical protein, complete cds.
AB234883.1:114-133
TCTCTCTCTTCCAATCCACCATGGATTGCA114GCATCTCCACCGTTCTTCTCCTCTCCTTTCTCACAATTCTCTCATCTTCT
Takifugu rubripes genome assembly, chromosome: 13.
LR584232.1:5814909-5814928
AGTTCTCTTGGTCAAGATTCGTTCTGGGAA5814909GAGAAGAACGGTGGAGATGCACAATAAGATCTATGCTATTCCTCTGGAAG
Trifolium repens isolate ACLI19 chromosome 06_0cc.
CP125846.1:52076257-52076276
AGAAGATGAAAGAATGGTGAGAAAGGAGAG52076257GAGAAGAACGGTGGAGATGCAATAATCCATGGTGGATTGGAAGAGAGAGA
Spirometra erinaceieuropaei genome assembly, scaffold: SPER_contig0009177.
LN127245.1:1278-1297
CTTGTGCCGATTATCAGCGTCGCGTAAGTG1278GAGAAGAACGGTGGAGATGCAGACACAAGTCTCCCTTTAATTAGCCGTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCATCTCCACCGTTCTTCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCATCTCCACCGTTCTTCTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.350 | 0.341 | search_plus_done; http://172.18.8.135:50400/match?q=GCATCTCCACCGTTCTTCTC&k=0&no_gap=0&offset=0&limit=50
0.465 | 0.116 | search_minus_done; http://172.18.8.135:50400/match?q=GAGAAGAACGGTGGAGATGC&k=0&no_gap=0&offset=0&limit=47
0.467 | 0.002 | cgi_end;

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