GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:20:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Musa acuminata AAA Group Unigene92776_NK1 mRNA sequence.
JV425639.1:509-528
TCGAATGGGCCGCAATAGAGTAGTAGGAAG509GCATGGGAACGACTGTACCTGCCGCCGGGTGGTGGTGGATGTAATGGGGG
Seq_sg_57-L18.f MAMB Musa acuminata subsp. malaccensis genomic, genomic survey sequence.
HN261679.1:136-155
TCGAATGGGCCGCAATAGAGTAGTAGGAAG136GCATGGGAACGACTGTACCTGCCGCCGGGTGGTGGTGGATGTAGTGGGGG
TSA: Musa acuminata AAA Group Unigene83740_B1 mRNA sequence.
JV352084.1:91-110
CCCCCATTACATCCACCACCACCCGGCGGC91AGGTACAGTCGTTCCCATGCCTTCCTACTACTCTATTGCGGCCCATTCGA
Musa troglodytarum cultivar karat chromosome 6.
CP097508.1:10510680-10510699
CCCCCATTACATCCACCACCACCCGGCGGC10510680AGGTACAGTCGTTCCCATGCCTTCCTACTACTCTATTGCGGCCCATTCGA
Musa acuminata subsp. malaccensis isolate AA chromosome 6.
CP126375.1:8182940-8182959
CCATTACATCCACCACCACCACCCGGCGGC8182940AGGTACAGTCGTTCCCATGCCTTCCTACTACTCTATTGCGGCCCATTCGA
Musa acuminata subsp. malaccensis isolate AA chromosome 17.
CP126386.1:8144496-8144515
CCATTACATCCACCACCACCACCCGGCGGC8144496AGGTACAGTCGTTCCCATGCCTTCCTACTACTCTATTGCGGCCCATTCGA
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A06.
HG996471.1:8101437-8101456
CCCCCACTACATCCACCACCACCCGGCGGC8101437AGGTACAGTCGTTCCCATGCCTTCCTACTACTCTATTGCGGCCCATTCGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCATGGGAACGACTGTACCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCATGGGAACGACTGTACCT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.208 | 0.200 | search_plus_done; http://172.18.8.135:50400/match?q=GCATGGGAACGACTGTACCT&k=0&no_gap=0&offset=0&limit=50
0.309 | 0.101 | search_minus_done; http://172.18.8.135:50400/match?q=AGGTACAGTCGTTCCCATGC&k=0&no_gap=0&offset=0&limit=48
0.313 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).