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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:36:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arachis hypogaea cultivar Shitouqi chromosome A02.
CP030984.1:97905547-97905566
GTGATTAGCTCTCACGGTTTACATAATAAT97905547GCATTTTGCACAAACACGTAACAACTTTTAGATTTGTGTATTTGAGTAAA
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:17920968-17920987
GTGGTTGGCTCCCACGGTTTACATAATAAT17920968GCATTTTGCACAAACACGTAACAACTTTTTGATTTGTGTATTTGGGCAAA
Arachis hypogaea cultivar Shitouqi chromosome A10.
CP030992.1:98493098-98493117
GTGGTTGGTTCCCACGGTTTACATAATAAT98493098GCATTTTGCACAAACACGTAACAACTTTTTGATTTGTGTATTTAGGTAAA
Coremacera marginata genome assembly, chromosome: 5.
OU612047.1:125664976-125664995
GTTGTCCCAACTCTATCATCTGTTTGCTGT125664976GCATTTTGCACAAACACGTAATTTTTACTAAACAAAAAATATTGACAATA
Episyrphus balteatus genome assembly, chromosome: 4.
OX244020.1:65581059-65581078
ATTCAAAGAGACTTTATATACCGCCAAGCA65581059GCATTTTGCACAAACACGTAACGACTTAAAGACAAAAAAAAAAAACCCAA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:105254799-105254818
TTTACCCAAATACACAAATCAAAAAGTTGT105254799TACGTGTTTGTGCAAAATGCATTATTATGTAAACCGTGAGAGCCAACCAC
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:39593089-39593108
TTTACCCAAATACACAAATCAGAAAGTTGT39593089TACGTGTTTGTGCAAAATGCATTATTATGTAAACCGTGGGAGCCAACCAC
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:43313775-43313794
TTTATCCAAATACACAAATCAAAAAATTGT43313775TACGTGTTTGTGCAAAATGCATTATTATGTAAACCGTGGGAGTCAATCAC
Pherbina coryleti genome assembly, chromosome: 3.
OX030950.1:14331418-14331437
ACTAAGCACAGCTCATTTTACTAAAGGATA14331418TACGTGTTTGTGCAAAATGCGTTGAATTAAAGAAACGGTGTAGAAGAATA
Pammene aurita genome assembly, chromosome: 8.
OX352298.1:14309811-14309830
GATATCTCTGTAGCTTAACATGGGATTTTT14309811TACGTGTTTGTGCAAAATGCGTTCACGTTTTTGATGTTGTACGCTCGACA
Pammene aurita genome assembly, chromosome: 13.
OX352303.1:9825637-9825656
GATATCTCTGTAGCTTAACATGGGATTTTT9825637TACGTGTTTGTGCAAAATGCGTTCACGTTTTTGATGTTGTACGCTCAACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCATTTTGCACAAACACGTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCATTTTGCACAAACACGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.186 | 0.177 | search_plus_done; http://172.18.8.135:50400/match?q=GCATTTTGCACAAACACGTA&k=0&no_gap=0&offset=0&limit=50
0.266 | 0.080 | search_minus_done; http://172.18.8.135:50400/match?q=TACGTGTTTGTGCAAAATGC&k=0&no_gap=0&offset=0&limit=45
0.270 | 0.004 | cgi_end;

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