GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 13:54:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Allium cepa genome assembly, chromosome: 2.
LR994630.1:150468947-150468966
ATGCGTTGTCTGGTAAAATAAATACAAGGT150468947GCCAACTCCTTCCTTGTAGATATATTGAAACTTCCAACCTAACATCACAA
Allium cepa genome assembly, chromosome: 2.
LR994630.1:389541339-389541358
ATGCGTTGTCTGGTAAAATAAATACAAGGT389541339GCCAACTCCTTCCTTGTAGATATATCGAAACTTCCAACCTTAACATTGCA
Allium cepa genome assembly, chromosome: 5.
LR994633.1:114153944-114153963
ATGCGTTGTCTGGTAAAATAAATACAAGGT114153944GCCAACTCCTTCCTTGTAGATATATCGAAACATCCAACCTTAACATCGCA
Thyatira batis genome assembly, chromosome: 17.
LR990502.1:5107441-5107460
ACCCCGAAGTTATGGTAGTAAGCAAACTAG5107441GCCAACTCCTTCCTTGTAGATCAATAGGATCTAAGTGGTAAAACCAGATG
Sepioteuthis lessoniana genome assembly, chromosome: 10.
OY757913.1:48490985-48491004
TGACATATAAACCTTCGTGGGTTACGTAAT48490985GCCAACTCCTTCCTTGTAGAATAATTTTGTGGTACGATTTAACCCATAGC
TSA: Cannabis sativa PK20543.1_1.CasaPuKu mRNA sequence.
JP450170.1:187-206
TCTCTTCGGAGAAGACTCGTTCAGTTGATT187TCTACAAGGAAGGAGTTGGCGGTGGCGGTGGGGGTGGTGGTGGTGGTGGA
TSA: Cannabis sativa PK20543.2_1.CasaPuKu mRNA sequence.
JP456216.1:42-61
TCTCTTCGGAGAAGACTCGTTCAGTTGATT42TCTACAAGGAAGGAGTTGGCGGTGGCGGTGGGGGTGGTGGTGGTGGTGGA
TSA: Allium cepa CUDHLF2_15267 mRNA sequence.
JR858085.1:283-302
TGCGATGTTAAGGTTGGAAGTTTCGATATA283TCTACAAGGAAGGAGTTGGCACCTTGTATTTATTTTACCAGACAACGCAT
Sepioteuthis lessoniana genome assembly, chromosome: 5.
OY757908.1:106346478-106346497
TCGACTATGGTCAGCCAACTTTACTGGTCT106346478TCTACAAGGAAGGAGTTGGCATAAATGTTCAAATTCTAGTCATGATTTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCCAACTCCTTCCTTGTAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCAACTCCTTCCTTGTAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.108 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=GCCAACTCCTTCCTTGTAGA&k=0&no_gap=0&offset=0&limit=50
0.157 | 0.049 | search_minus_done; http://172.18.8.135:50400/match?q=TCTACAAGGAAGGAGTTGGC&k=0&no_gap=0&offset=0&limit=45
0.160 | 0.003 | cgi_end;

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