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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:07:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Papaver somniferum cultivar Roxanne chromosome 3.
CP048215.1:107568341-107568360
GTCTACGAAATGTTAGTAGCAGAATGTCAT107568341GCCAATATCTCCAGTTTCATTTGATGTAACACGACCAAAATAAATTTCGG
Brassica rapa genome, scaffold: A07.
LR031574.1:18510945-18510964
AACGGAGTACAAGCCTATCCTTCCCGTTGC18510945GCCAATATCTCCAGTTTCATGCAAAATCTACTTTGTATACACAATACAAA
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:18802340-18802359
AACGGAGTACAAGCCTATCCTTCCCGTTGC18802340GCCAATATCTCCAGTTTCATGCAAAATCTACTTTGTATACACAATACAAA
Apteryx australis mantelli genome assembly, scaffold: scaffold174.
LK064744.1:72232-72251
AATGAAGGCAATCACCTGAAAAGCTATAAA72232ATGAAACTGGAGATATTGGCAAAGCAGGGGACATAAAGCTTGACTAGAAA
Somateria mollissima genome assembly, chromosome: 3.
OX598304.1:92628313-92628332
TAAAGTATGTGTAAAACACTCACTGGCATC92628313ATGAAACTGGAGATATTGGCATTTTTTCCACACTAACTTGATTGTATGCA
Somateria mollissima genome assembly, chromosome: 3.
OX598692.1:92738478-92738497
TAAAGTATGTGTAAAACACTCACTGGCATC92738478ATGAAACTGGAGATATTGGCATTTTTTCCACACTAACTTGATTGTATGCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCAATATCTCCAGTTTCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCAATATCTCCAGTTTCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.178 | 0.169 | search_plus_done; http://172.18.8.135:50400/match?q=GCCAATATCTCCAGTTTCAT&k=0&no_gap=0&offset=0&limit=50
0.296 | 0.118 | search_minus_done; http://172.18.8.135:50400/match?q=ATGAAACTGGAGATATTGGC&k=0&no_gap=0&offset=0&limit=47
0.298 | 0.002 | cgi_end;

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