GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-14 21:22:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 944 from patent US 7196245.
EA107362.1:1-20
1GCCATGGACAACTCTCACCTCCTCCAATATAATTCCCAACACCACCACTT
Sequence 945 from patent US 7196245.
EA107363.1:128-147
CACACCTACCCTATCATCATGCACCACTTT128GCCATGGACAACTCTCACCTCCTCCAATTCCTTCCCAACACCACCACCAC
Sequence 944 from patent US 7825296.
GX710684.1:1-20
1GCCATGGACAACTCTCACCTCCTCCAATATAATTCCCAACACCACCACTT
Sequence 945 from patent US 7825296.
GX710685.1:128-147
CACACCTACCCTATCATCATGCACCACTTT128GCCATGGACAACTCTCACCTCCTCCAATTCCTTCCCAACACCACCACCAC
Sequence 944 from patent US 8541665.
HJ423452.1:1-20
1GCCATGGACAACTCTCACCTCCTCCAATATAATTCCCAACACCACCACTT
Sequence 945 from patent US 8541665.
HJ423453.1:128-147
CACACCTACCCTATCATCATGCACCACTTT128GCCATGGACAACTCTCACCTCCTCCAATTCCTTCCCAACACCACCACCAC
Sequence 944 from Patent EP2270167.
JA865084.1:1-20
1GCCATGGACAACTCTCACCTCCTCCAATATAATTCCCAACACCACCACTT
Sequence 945 from Patent EP2270167.
JA865085.1:128-147
CACACCTACCCTATCATCATGCACCACTTT128GCCATGGACAACTCTCACCTCCTCCAATTCCTTCCCAACACCACCACCAC
Sequence 944 from Patent EP2270166.
JA869986.1:1-20
1GCCATGGACAACTCTCACCTCCTCCAATATAATTCCCAACACCACCACTT
Sequence 945 from Patent EP2270166.
JA869987.1:128-147
CACACCTACCCTATCATCATGCACCACTTT128GCCATGGACAACTCTCACCTCCTCCAATTCCTTCCCAACACCACCACCAC
sac23a07.y1 Gm-c1051 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1051-3085 5' similar to TR:O80674 O80674 T3K9.10 PROTEIN, mRNA sequence.
BG359349.1:127-146
CACACCTACCCTATCATCATGCACCACTTT127GCCATGGACAACTCTCACCTCCTCCAATTCCTTCCCAACACCACCACCAC
sai15f12.y1 Gm-c1053 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1053-3359 5' similar to TR:O80674 O80674 T3K9.10 PROTEIN, mRNA sequence.
BI498559.1:1-20
1GCCATGGACAACTCTCACCTCCTCCAATATAATTCCCAACACCACCACTT
Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
AP015037.1:38036847-38036866
ACCTACCCTATCTTCTTCATGCACCACTCA38036847GCCATGGACAACTCTCACCTTCTTCAATTCCTTCCAAACACCACCACCAC
Glycine max cultivar Williams 82 chromosome 3.
CP126428.1:37084748-37084767
TACCCTATCATCATGCACCACTTCGCCTTT37084748GCCATGGACAACTCTCACCTCCTCCAATTCCTTCCCAACACCACCACTTC
Glycine max cultivar Williams 82 chromosome 19.
CP126444.1:41824634-41824653
CACACCTACCCTATCATCATGCACCACTTT41824634GCCATGGACAACTCTCACCTCCTCCAATTCCTTCCCAACACCACCACCAC
Sequence 10998 from patent US 9029636.
HK920061.1:593-612
GTGGTGGTGGTGTTGGGAAGGAATTGGAGG593AGGTGAGAGTTGTCCATGGCAAAGTGGTGCATGATGATAGG
Sequence 55246 from patent US 9029636.
HK964309.1:161-180
GAAGTGGTGGTGTTGGGAAGGAATTGGAGG161AGGTGAGAGTTGTCCATGGCAAAGGCAAAGTGGTGCATGATGATAGGGTA
Vigna unguiculata cultivar Xiabao 2 chromosome Vu01.
CP039350.1:31107513-31107532
GTGGTGGTGGTGTTTGGAAGGAATTGAAGA31107513AGGTGAGAGTTGTCCATGGCGAAGTGGTGCATGAAGAAGATTAAGATAGG
Vigna unguiculata cultivar Xiabao 2 chromosome Vu01.
CP039350.1:31109041-31109060
GTGGTGGTGGTGTTTGGAAGGAATTGAAGA31109041AGGTGAGAGTTGTCCATGGCGAAGTGGTGCATGAAGAAGATTAAGATAGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCCATGGACAACTCTCACCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCATGGACAACTCTCACCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.381 | 0.372 | search_plus_done; http://172.18.8.135:50400/match?q=GCCATGGACAACTCTCACCT&k=0&no_gap=0&offset=0&limit=50
0.493 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=AGGTGAGAGTTGTCCATGGC&k=0&no_gap=0&offset=0&limit=35
0.495 | 0.003 | cgi_end;

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