GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 18:03:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Geotrypetes seraphini genome assembly, chromosome: 8.
LR699153.1:73383202-73383221
CTGAGCTCTGCCCTATAAGGGCACTGTGCA73383202GCCATTGGTCTTCTGTATTTCAGATGATGAAACAATAGAAATGAAGTATT
Gobius niger genome assembly, chromosome: 20.
OX637614.1:13926315-13926334
AGAAAAGCATGTGAGATAAACTATAGTGTG13926315GCCATTGGTCTTCTGTATTTTTGAAGTTGTTGTCTCTAGGTTTTTATGAT
Elaeis guineensis EST, clone (6lib)_isotig25949.
LM617934.1:262-281
TCATTTCTCTCTCAACACAACATAATTGTG262GCCATTGGTCTTCTGTATTTTTGATATTCTTCTTAAAATATCTGCAAAAG
CH216-161E5_Sp5.1 CH216 Xenopus tropicalis genomic clone CH216-161E5, genomic survey sequence.
CL081287.1:352-371
TTTACTACGATATCGAGTATGCCGCAATTT352GCCATTGGTCTTCTGTATTTACAAATTACGGTTTTTGAATTAATTCCCTC
Brachypalpus laphriformis genome assembly, chromosome: 3.
OX246755.1:157853770-157853789
TGACATCTCTGATGGCTTGTTGGCAACGCT157853770GCCATTGGTCTTCTGTATTTGCTGTTGGCGGCATAGGACTTAGATTGAGA
Aspidapion aeneum genome assembly, chromosome: 1.
OY755038.1:44574629-44574648
AGCCCCCCCCCCCCTGGAAATCCTGGATCC44574629GCCATTGGTCTTCTGTATTTACTACGTAGGTGATTTTATATGTAAGGATT
Sarcophilus harrisii genome assembly, chromosome: 4.
LR735557.1:70810704-70810723
GATCTAATATCTGAAATACATAATTAACAC70810704AAATACAGAAGACCAATGGCCATTTTCCAATTGATGTAATCAAAGGAAAT
pOP-EAP03223_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP03223 5', mRNA sequence.
EY407125.1:284-303
CTTTTGCAGATATTTTAAGAAGAATATCAA284AAATACAGAAGACCAATGGCCACAATTATGTTGTGTTGAGAGAGAAATGA
TSA: Elaeis guineensis isotig08547.Elguifruit mRNA sequence.
JO095777.1:581-600
CTTTTGCAGATATTTTAAGAAGAATATCAA581AAATACAGAAGACCAATGGCCACAATTATGTTGTGTTGAGAGAGAAATGA
Volucella inflata genome assembly, chromosome: 1.
OV743716.1:7868061-7868080
TCTCTCAATAACTCCTATGAAACCAGGATC7868061AAATACAGAAGACCAATGGCAATGCTGCCAATGTGCCAGCAGATATGTCG
Cheilosia urbana genome assembly, chromosome: 1.
OX297853.1:105023663-105023682
TCTCGCAGTGCCAAGACTTATACCAGCATT105023663AAATACAGAAGACCAATGGCAACGCTGCTTATATGCCTAAGAAAAACCGC
Aspidapion aeneum genome assembly, chromosome: 1.
OY755038.1:45563974-45563993
AATCCTCACACATTAAATCACGTTCGTAGT45563974AAATACAGAAGACCAATGGCGGATCCAGGATTTCCAGGGGGAGGAGCCAA
Volucella zonaria genome assembly, chromosome: 1.
OZ014530.1:276154058-276154077
GCTATGGCGAGATCATGCAAATCGTAATTT276154058AAATACAGAAGACCAATGGCAATAGTGACAATTGAGAAACGTCACAACTG
Volucella zonaria genome assembly, chromosome: 2.
OZ014531.1:189264756-189264775
TCTCTCAACAACTCCTATGCTACCAGCATT189264756AAATACAGAAGACCAATGGCAACGCTGCCAACATAACATCAAAGACCGCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCCATTGGTCTTCTGTATTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCATTGGTCTTCTGTATTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.446 | 0.438 | search_plus_done; http://172.18.8.135:50400/match?q=GCCATTGGTCTTCTGTATTT&k=0&no_gap=0&offset=0&limit=50
0.641 | 0.195 | search_minus_done; http://172.18.8.135:50400/match?q=AAATACAGAAGACCAATGGC&k=0&no_gap=0&offset=0&limit=44
0.646 | 0.005 | cgi_end;

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