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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:17:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 24431 from patent US 9029636.
HK933494.1:1415-1439
GCATTTGTCATTTGGACACATCTGATTGGA1415GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT
gmrhRww3-15_A07_1_063 Soybean root hair subtracted cDNA library gmrhRww3 Glycine max cDNA, mRNA sequence.
CF920487.1:6-30
GCGGG6GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT
GLNAX44TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV280789.1:350-374
GCATTTGTCATTTGGACACATCTGATTGGA350GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT
GLNAZ73TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV280990.1:552-576
GCATTTGTCATTTGGACACATCTGATTGGA552GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT
GLNBE72TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV282279.1:350-374
GCATTTGTCATTTGGACACATCTGATTGGA350GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT
abe73h11.y1 Soybean methylation filtered genomic library Glycine max genomic, genomic survey sequence.
CL871202.1:263-287
GCATTTGTCATTTGGACACATCTGATTGGA263GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT
Soybean clone JCVI-FLGm-10N5 unknown mRNA.
BT092330.1:552-576
GCATTTGTCATTTGGACACATCTGATTGGA552GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT
GM830007B20H04 Gm-r1083 Glycine max cDNA clone Gm-r1083-2672 3', mRNA sequence.
BI969302.1:278-302
ACTGAATCCTTCCCAGGCTTGATTCCAAGT278TGCCTAAATATGATGTGATTTGGGCTCCAATCAGATGTGTCCAAATGACAAATGC
gmrtDrNS01_25-B_M13R_H03_017.s3 Water stressed 48h segment 1 gmrtDrNS01 Glycine max cDNA 3', mRNA sequence.
CX705382.1:439-463
ACTGAATCCTTCCCAGGCTTGATTCCAAGT439TGCCTAAATATGATGTGATTTGGGCTCCAATCAGATGTGTCCAAATGACAAATGC
Glycine max cultivar Williams 82 chromosome 11.
CP126436.1:9130238-9130262
ACTGAATCCTTCCCAGGCTTGATTCCAAGT9130238TGCCTAAATATGATGTGATTTGGGCTCCAATCAGATGTGTCCAAATGACAAATGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCCAAATCACATCATATTTAGGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCCAAATCACATCATATTTAGGCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.758 | 0.749 | search_plus_done; http://172.18.8.135:50400/match?q=GCCCAAATCACATCATATTTAGGCA&k=0&no_gap=0&offset=0&limit=50
0.919 | 0.161 | search_minus_done; http://172.18.8.135:50400/match?q=TGCCTAAATATGATGTGATTTGGGC&k=0&no_gap=0&offset=0&limit=43
0.921 | 0.002 | cgi_end;

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