GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 17:28:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Elaeis guineensis EST, clone (6lib)_isotig03028.
LM621907.1:1035-1054
ATAATTTATAAGGACCTTGCAACCAGCTTT1035GCCCAAGGCTAATGCTATTGCTTTTCCAATTCCTCTAGAACCTCCAGTGA
TSA: Elaeis guineensis isotig09219.Elguifruit mRNA sequence.
JO096446.1:967-986
ATAATTTATAAGGACCTTGCAACCAGCTTT967GCCCAAGGCTAATGCTATTGCTTTTCCAATTCCTCTAGAACCTCCAGTGA
Gobio gobio genome assembly, chromosome: 16.
OX442389.1:24442973-24442992
TAGCCTTGAGCGTTTTGAAAACAACATGGA24442973CAATAGCATTAGCCTTGGGCGCAGCATGGCTTAGCATTTAGCATTAGCCT
EG-A11_001_A07 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN599688.1:323-342
TCACTGGAGGTTCTAGAGGAATTGGAAAAG323CAATAGCATTAGCCTTGGGCAAAGCTGGTTGCAAGGTCCTTATAAATTAT
EG-M01_007_H09 Oil palm male inflorescence Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN601488.1:315-334
TCACTGGAGGTTCTAGNGGAATTNNAAAAG315CAATAGCATTAGCCTTGGGCAAAGCTGGTTGCAAGGTCCTTATAAATTAT
Elaeis guineensis EST, clone (6lib)_isotig45679.
LM641813.1:237-256
TCACTGGAGGTTCTAGAGGAATTGGAAAAG237CAATAGCATTAGCCTTGGGCAAAGCTGGTTGCAAGGTCCTTATAAATTAT
Elaeis guineensis clone Eg-C4-130 putative 3 oxoacyl acyl carrier protein reductase (KRACP) mRNA, partial cds.
JN003497.1:82-101
TCACTGGAGGTTCTAGAGGAATTGGAAAAG82CAATAGCATTAGCCTTGGGCAAAGCTGGTTGCAAGGTCCTTATAAATTAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCCCAAGGCTAATGCTATTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCCAAGGCTAATGCTATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.198 | 0.190 | search_plus_done; http://172.18.8.135:50400/match?q=GCCCAAGGCTAATGCTATTG&k=0&no_gap=0&offset=0&limit=50
0.381 | 0.183 | search_minus_done; http://172.18.8.135:50400/match?q=CAATAGCATTAGCCTTGGGC&k=0&no_gap=0&offset=0&limit=48
0.384 | 0.003 | cgi_end;

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