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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-14 19:09:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

RS1A044TR RS1(AR) Raphanus sativus var. oleiformis cDNA 3', mRNA sequence.
EW718356.1:226-247
GAAACAAAGAAGTGTATGGCATCTTAACTG226GCCCAGTCCTGTTCTTGAGATTCTCGTCTTCGTTCCTTTCATCAATCTTCTT
RS1A044JQ RS1(AR) Raphanus sativus var. oleiformis cDNA 3', mRNA sequence.
EW718617.1:226-247
GAAACAAAGAAGTGTATGGCATCTTAACTG226GCCCAGTCCTGTTCTTGAGATTCTCGTCTTCGTTCCTTTCATCAATCTTCTT
RS2BU85JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
EX899540.1:293-314
GAAACAAAGAAGTGTATGGCATCTTAACTG293GCCCAGTCCTGTTCTTGAGATTCTCGTCTTCGTTCCTTTCATCAATCTTCTT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_47592.
FX754773.1:207-228
GAAACAAAGAAGTGTATGGCATCTTAACTG207GCCCAGTCCTGTTCTTGAGATTCTCGTCTTCGTTCCTTTCATCAATCTTCTT
TSA: Raphanus sativus RS25851 mRNA sequence.
JT810398.1:246-267
GAAACAAAGAAGTGTATGGCATCTTAACTG246GCCCAGTCCTGTTCTTGAGATTCTCGTCTTCGTTCCTTTCATCAATCTTCTT
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:9697897-9697918
GAAACAAAGAAGTGTATGGCATCTTAACTG9697897GCCCAGTCCTGTTCTTGAGATTCTCGTCTTCGTTCCTTTCATCAATCTTCTT
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:9697897-9697918
GAAACAAAGAAGTGTATGGCATCTTAACTG9697897GCCCAGTCCTGTTCTTGAGATTCTCGTCTTCGTTCCTTTCATCAATCTTCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCCAGTCCTGTTCTTGAGATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCCAGTCCTGTTCTTGAGATT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.466 | 0.458 | search_plus_done; http://172.18.8.135:50400/match?q=GCCCAGTCCTGTTCTTGAGATT&k=0&no_gap=0&offset=0&limit=50
0.571 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=AATCTCAAGAACAGGACTGGGC&k=0&no_gap=0&offset=0&limit=43
0.571 | 0.000 | cgi_end;

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