GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-14 21:22:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Gadus macrocephalus isolate Gmac_GOA_2020 chromosome 2.
CP133503.1:10853121-10853140
GCAATACCTTTTATTGTAGTGAGGTTTCCA10853121GCCCAGTGTGAAATGGTTTTATCCTTGCTTTAAGAGGGCAGACTTAAGTC
Gadus macrocephalus isolate Gmac_GOA_2020 chromosome 2.
CP133526.1:11131301-11131320
GCAATACCTTTTATTGTAGTGAGGTTTCCA11131301GCCCAGTGTGAAATGGTTTTATCCTTGCTTTAAGAGGGCAGACTTAAGTC
Gadus morhua genome assembly, chromosome: 2.
LR633944.1:13561168-13561187
GCAATACCTTTTATTGTAGTGAGGTTTCCA13561168GCCCAGTGTGAAATGGTTTTATCCTTGCTTTAAGAGGGCAGACTTAAGTC
Sequence 4041 from patent US 8183436.
GZ317651.1:946-965
AAGGAATAGAAGGTGCCAAAGAGAAGGAAT946GCCCAGTGTGAAATGGTTTTAATATTATATATATATATATATATATATAT
se72d11.y1 Gm-c1023 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1023-238 5' similar to TR:P93332 P93332 MTN3 GENE PRECURSOR, mRNA sequence.
AW164432.1:486-505
AAGGAATAGAAGGTGCCAAAGAGAAGGAAT486GCCCAGTGTGAAATGGTTTTAATATTATATATATATATATATATATATAT
GM_WBb0037F08.f GM_WBb Glycine max genomic clone GM_WBb0037F08 5', genomic survey sequence.
ED697355.1:232-251
AGGAGAAAGGCGTGGAATTAGGCAAGGAAT232GCCCAGTGTGAAATGGTTTTAATATTATATATATATGCTCAGTGCAATTG
Glycine max cultivar Williams 82 chromosome 5.
CP126430.1:33861655-33861674
AGGAGAAAGGCGTGGAATTAGGCAAGGAAT33861655GCCCAGTGTGAAATGGTTTTAATATTATATATATATGCTCAGTGCAATTG
Glycine max cultivar Williams 82 chromosome 8.
CP126433.1:5883448-5883467
AAGGAATAGAAGGTGCCAAAGAGAAGGAAT5883448GCCCAGTGTGAAATGGTTTTAATATTATATATATATATATATATATATAT
Nemoura dubitans genome assembly, chromosome: 5.
OV121078.1:6068697-6068716
AACCAGTGAGACTTTTATTTGGCATTGAAA6068697GCCCAGTGTGAAATGGTTTTTCCACACCGATTGGGACTGTGTTTGCAGGT
Micromys minutus genome assembly, chromosome: 16.
OZ004796.1:14059087-14059106
TGTCCAGTCATAAAAGGACTACTTCTGGGT14059087AAAACCATTTCACACTGGGCTGAAAGAATACTTGGTGGAAGAGAAGTCGT
GM880002A10H09 Gm-r1088 Glycine max cDNA clone Gm-r1088-737 3', mRNA sequence.
BU544255.1:192-211
ATATATATATATATATATATATATAATATT192AAAACCATTTCACACTGGGCATTCCTTCTCTTTGGCACCTTCTATTCCTT
Fragum whitleyi genome assembly, chromosome: 14.
OX411556.1:3177941-3177960
ATTGTAACTCCCTATATGCTATATGGAGTA3177941AAAACCATTTCACACTGGGCCATCAATATGTGCTCTGTAAATTGACAACG
Luidia sarsii genome assembly, chromosome: 7.
OX465107.1:6158352-6158371
GATGTCTGCAGGGAGGGAGGGTCTGGGCTT6158352AAAACCATTTCACACTGGGCCACTACTATACTCATCGGTGCCTATGGCCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCCCAGTGTGAAATGGTTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCCAGTGTGAAATGGTTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.169 | 0.160 | search_plus_done; http://172.18.8.135:50400/match?q=GCCCAGTGTGAAATGGTTTT&k=0&no_gap=0&offset=0&limit=50
0.207 | 0.037 | search_minus_done; http://172.18.8.135:50400/match?q=AAAACCATTTCACACTGGGC&k=0&no_gap=0&offset=0&limit=41
0.209 | 0.003 | cgi_end;

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