GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 11:51:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CGN-44387 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w13i13 5', mRNA sequence.
DV698691.1:481-500
GAGCTCTACTCCGTCTCCCCAAGGGCATTG481GCCCGCATGGACGACTTGGAGGGCGTCACTCGCGGTCACTACGAGAGGCT
CGN-47495 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w24o12 5', mRNA sequence.
DV701322.1:481-500
GAGCTCTACTCCGTCTCCCCAAGGGCATTG481GCCCGCATGGACGACTTGGAGGGCGTCACTCGCGGTCACTACGAGAGGCT
CC-L01_022_A12 Coffea young leaves Coffea canephora cDNA clone CC-L01_022_A12, mRNA sequence.
EE193346.1:459-478
GAGCTCTACTCCGTCTCCCCAAGGGCATTG459GCCCGCATGGACGACTTGGAGGGCGTCACTCGCGGTCACTACGAGAGGCT
Eristalis pertinax genome assembly, chromosome: 3.
OU026147.1:11540342-11540361
GAATTGGTAGCGCTTGATTTGCCTGCCATA11540342GCCCGCATGGACGACTTGGATCGTACCGAACAGAGACCACGACGGAGGGA
CA00-XX-IA2-002-F12-EC.F Coffea arabica IA2 Coffea arabica cDNA clone CA00-XX-IA2-002-F12-EC, mRNA sequence.
GW440278.1:256-275
AGCCTGTCGTAGTGACCGCGAGTGACGCCC256TCCAAGTCGTCCATGCGGGCCAATGCCCTTGGGGAGACGGAGTAGAGCTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCCCGCATGGACGACTTGGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCCGCATGGACGACTTGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.270 | 0.261 | search_plus_done; http://172.18.8.135:50400/match?q=GCCCGCATGGACGACTTGGA&k=0&no_gap=0&offset=0&limit=50
0.401 | 0.132 | search_minus_done; http://172.18.8.135:50400/match?q=TCCAAGTCGTCCATGCGGGC&k=0&no_gap=0&offset=0&limit=46
0.402 | 0.001 | cgi_end;

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