GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 17:29:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS23052B09 KS23 Capsicum annuum cDNA, mRNA sequence.
GD115843.1:38-56
TTGTTATTCCTTCTTCACCCCTCCCGGCCG38GCCCGCCATTGAAAGTTATCATCACGAATATATATATATATATATATAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:7240127-7240145
TTGTTATTCCTTCTTCACCCCTCCCGGCCG7240127GCCCGCCATTGAAAGTTATCATCACGAATATATATATATATATATATAT
Capitulum mitella isolate CP1-10 chromosome 5.
CP099843.1:14849192-14849210
CGCGGTGAAAGCTGCCTTAGATGAATGTGC14849192GCCCGCCATTGAAAGTTATTTCGGGTGGCCTTTGCGGCAGTGACACGAT
Anopheles cruzii genome assembly, chromosome: 2.
OX030879.1:6465431-6465449
ACAACGTCTCGCGCAAGATCCATTGAAGGC6465431GCCCGCCATTGAAAGTTATAAAATAAATTCAAAGTTGAGAATAAATCAA
Eustoma grandiflorum DNA, chromosome 24, draft genome sequence.
AP025063.1:9004071-9004089
CAAAAGCCAATGCGTTCAAACACATCACGA9004071ATAACTTTCAATGGCGGGCGGCCATACCAAAAAGTGCCCACAAGCGAGA
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:284906563-284906581
ATATATATATATATATATATATTCGTGATG284906563ATAACTTTCAATGGCGGGCCGGCCGGGAGGGGTGAAGAAGGAATAACAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCCCGCCATTGAAAGTTAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCCGCCATTGAAAGTTAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.181 | 0.172 | search_plus_done; http://172.18.8.135:50400/match?q=GCCCGCCATTGAAAGTTAT&k=0&no_gap=0&offset=0&limit=50
0.200 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=ATAACTTTCAATGGCGGGC&k=0&no_gap=0&offset=0&limit=46
0.201 | 0.001 | cgi_end;

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