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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-16 23:30:34, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Vibrio phage phiV208, complete genome.
MT227924.1:34072-34089
CTCAGTCTTTCTAATTCCGTATCGCGCTAT34072GCCGTCGTCATCTTCTACTACTTCAACCTTTGATTTATAGAAATTTGA
d07_21na_1e.s 21na Brassica napus cDNA clone d07_21na_1e 5, mRNA sequence.
GT085871.1:926-943
AAAACCTAATTGAACCTAAAACTAATCTAC926GCCGTCGTCATCTTCTACTCCGCCTTTCTA
HMA020524G10.T3 GLEST02 Ganoderma lucidum cDNA 3', mRNA sequence.
HO727734.1:28-45
ATCTTTTGGCTCGTCTTCCTCTTCAAT28GCCGTCGTCATCTTCTACATCATCGAGTTCGGCCGTCTCCTCTGTCCC
CFGZ9262.b1 CFGZ Setaria italica Yugu1 floral spike Setaria italica cDNA clone CFGZ9262 5', mRNA sequence.
JK596439.1:164-181
GTGCTCCCAGCGCAGAGCAAGGAGAACCTT164GCCGTCGTCATCTTCTACGGCACAGCCCGATGCAAGAGCAACCCCTCC
TSA: Nitella mirabilis comp18946_c0_seq1 mRNA sequence.
JV773462.1:1009-1026
TAATCGTCCGTCAAGGTATCTGTCAGTGGC1009GCCGTCGTCATCTTCTACCTCCACTGCCGTCACGCAGCCCTCTTCTTC
TSA: Nitella mirabilis comp18946_c0_seq2 mRNA sequence.
JV773463.1:905-922
TAATCGTCCGTCAAGGTATCTGTCAGTGGC905GCCGTCGTCATCTTCTACCTCCACTGCCGTCACGCAGCCCTCTTCTTC
BOHWZ86TF BO_2_3_KB Brassica oleracea genomic clone BOHWZ86, genomic survey sequence.
BH720800.1:441-458
ATATTAAACCAAAACCTAAAACTAATCTAC441GCCGTCGTCATCTTCTACTCCGCCTTTCTATTCTTCTTCTTCTTCTTC
BONGN95TR BO_1.6_2_KB_tot Brassica oleracea genomic clone BONGN95, genomic survey sequence.
BZ486369.1:762-779
AAAACCTAATTGAACCTAAAACTAATCTAC762GCCGTCGTCATCTTCTACTCCGCCTTTCTATTCTTCTTCTTCTTCTTC
HDE150L23.F HDE Setaria viridis genomic 5', genomic survey sequence.
KS049514.1:315-332
GTGCTCCCAGCGCAGAGCAAGGAGAACCTT315GCCGTCGTCATCTTCTACGGCACAGCCCGATGCAAGAGCAACCCCTCC
Zea mays cultivar B73 chromosome 8 clone CH201-282O5, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.
AC186513.5:42628-42645
TTCTGGTAGCATGGCAACAACCACAGATGC42628GCCGTCGTCATCTTCTACATCTTCCTCAATGAAAAGGGTGCAAAGACA
Zea mays cultivar B73 chromosome 8 clone CH201-123J4, *** SEQUENCING IN PROGRESS ***, 16 unordered pieces.
AC195552.5:182891-182908
TTCTGGTAGCATGGCAACAACCACAGATGC182891GCCGTCGTCATCTTCTACATCTTCCTCAATGAAAAGGGTGCAAAGACA
Zea mays cultivar B73 chromosome 6 clone CH201-526M18, *** SEQUENCING IN PROGRESS ***, 11 unordered pieces.
AC198732.5:49632-49649
CGTCAGTAGCATGGCAACAACCTCAGATGC49632GCCGTCGTCATCTTCTACATCTTCCTCAATGAAAAGGGTGCAAAGACG
Aureococcus anophagefferens strain CCMP1984 isolated from Great South Bay, Long Island, New York clone JGIAXBH213P09, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
AC236314.1:26710-26727
AGCGAGGCCGAGTCGAAGGTCTTCCTCTCG26710GCCGTCGTCATCTTCTACTTGGTGCTCTTCGGCACCGTTTGCTTCAAG
Setaria viridis cultivar ME034v chromosome 6.
CP050800.1:32844127-32844144
GTGCTCCCAGCGCAGAGCAAGGAGAACCTT32844127GCCGTCGTCATCTTCTACGGCACAGCCCGATGCAAGAGCAACCCCTCC
Setaria viridis cultivar ME034v chromosome 6.
CP050800.1:32852226-32852243
GTGCTCCCAGCGCAGAGCAAGGAGAACCTT32852226GCCGTCGTCATCTTCTACGGCACAGCCCGATGCAAGAGCAACCCCTCC
Setaria viridis cultivar ME034v chromosome 6.
CP050800.1:32876200-32876217
GTGCTCCCAGCGCAGAGCAAGGAGAACCTT32876200GCCGTCGTCATCTTCTACGGCACAGCCCGATGCAAGAGCAACCCCTCC
Setaria viridis cultivar ME034v chromosome 6.
CP050800.1:32900529-32900546
GTGCTCCCAGCGCAGAGCAAGGAGAACCTT32900529GCCGTCGTCATCTTCTACGGCACAGCCCGATGCAAGAGCAACCCCTCC
Cenchrus purpureus cultivar elephant grass chromosome A4.
CP053457.1:69896059-69896076
AAGGAGAACCTTGCCGGCAGAGAGAACCTT69896059GCCGTCGTCATCTTCTACGGCACAGCCCGATGCAAGAGCAATCCCTCC
Zea mays cultivar LT2357 chromosome 2.
CP116740.1:7875188-7875205
CGTCAGTAGCATGGCAACAACCTCAGATGC7875188GCCGTCGTCATCTTCTACATCTTCCTCAATGAAAAGGGTGCAAAGACG
Zea mays cultivar LT2357 chromosome 6.
CP116744.1:36594482-36594499
CGTCAGTAGCATGGCAACAACCTCAGATGC36594482GCCGTCGTCATCTTCTACATCTTCCTCAATGAAAAGGGTGCAAAGACG
Zea mays cultivar LT2357 chromosome 7.
CP116745.1:40338905-40338922
TTCTGGTAGCATGGCAACAACCTCAGATGC40338905GCCGTCGTCATCTTCTACATCTTCCTCAATGAAAAGGGTGCAAAGACG
Brassica napus cultivar Xiang5A chromosome 11.
CP123886.1:19532280-19532297
AAAACCTAATTGAACCTAAAACTAATCTAC19532280GCCGTCGTCATCTTCTACTCCGCCTTTCTATTCTTCTTCTTCTTCTTC
Brassica napus cultivar Xiang5A chromosome 11.
CP123886.1:21885847-21885864
AAAACCTAATTGAACCTAAAACTAATCTAC21885847GCCGTCGTCATCTTCTACTCCGCCTTTCTATTCTTCTTCTTCTTCTTC
Panicum miliaceum cultivar AJ8 chromosome 7A.
CP142746.1:18305214-18305231
TGTGAACTCGACCTCCACCGGCTGCTGGGC18305214GCCGTCGTCATCTTCTACCAACAGCGAATAGCACACGGCAAGAGAAGT
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:9596206-9596223
AGATTAAACCAAAACCTAAAACTAATCTAC9596206GCCGTCGTCATCTTCTACTCCGCCTTTCTATTCTCTTCTACTCTGCCT
Zea mays genome assembly, chromosome: 6.
LR897972.1:35769973-35769990
CGTCAGTAGCATGGCAACAACCTCAGATGC35769973GCCGTCGTCATCTTCTACATCTTCCTCAATGAAAAGGGTGCAAAGACG
Zea mays genome assembly, chromosome: 8.
LR897974.1:82405672-82405689
TTCTGGTAGCATGGCAACAACCACAGATGC82405672GCCGTCGTCATCTTCTACATCTTCCTCAATGAAAAGGGTGCAAAGACA
Hordeum bulbosum genome assembly, chromosome: 5H_3.
OY737507.1:27930005-27930022
ATGGTCAGAGCATCTCCTAGAACTGGGGAT27930005GCCGTCGTCATCTTCTACTCCGTCGGGCAGGTCCTGCAGGTGCCCCTC
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737888.1:193758561-193758578
CGTTCTGGGCTCCGAAGAGGGGAAATCGAC193758561GCCGTCGTCATCTTCTACCATCCTCCATCGCCAATTCCATGATGCTCT
Hordeum bulbosum genome assembly, chromosome: 5H_3.
OY740966.1:27930005-27930022
ATGGTCAGAGCATCTCCTAGAACTGGGGAT27930005GCCGTCGTCATCTTCTACTCCGTCGGGCAGGTCCTGCAGGTGCCCCTC
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY741435.1:193758561-193758578
CGTTCTGGGCTCCGAAGAGGGGAAATCGAC193758561GCCGTCGTCATCTTCTACCATCCTCCATCGCCAATTCCATGATGCTCT
Zea mays subsp. mays genome assembly, chromosome: 8.
OY741937.1:81553971-81553988
TTCTGGTAGCATGGCAACAACCACAGATGC81553971GCCGTCGTCATCTTCTACATCTTCCTCAATGAAAAGGGTGCAAAGACA
Narthecium ossifragum genome assembly, chromosome: 2.
OY986964.1:10424732-10424749
GAGGCGGCCATCGTCATCTCCAACTAGCGA10424732GCCGTCGTCATCTTCTACTAGAGAGCCATCACCCGGGACTCTACACGT
Narthecium ossifragum genome assembly, chromosome: 2.
OY986964.1:28612815-28612832
GAGGCGGCCATCGTCATCTCCAACTAGCGA28612815GCCGTCGTCATCTTCTACTAGAGAGCCATCACCATGGACTCCGCACGT
Narthecium ossifragum genome assembly, chromosome: 2.
OY986964.1:35894456-35894473
GAGGCGGCCATCGTCATCTCCAACTAGCGA35894456GCCGTCGTCATCTTCTACTAGAGAGCCATCACCCGGGACTCCGCACGT
Narthecium ossifragum genome assembly, chromosome: 7.
OY986969.1:27484299-27484316
GAGGCGGCCATCGTCATCTCCAACTAGCGA27484299GCCGTCGTCATCTTCTACTAGAGAGCCATCACCCGGGACTCTGCACGT
Narthecium ossifragum genome assembly, chromosome: 8.
OY986970.1:3019140-3019157
GAGGCGGCCATCGTCATCTCCAACTAGCGA3019140GCCGTCGTCATCTTCTACTTAGAGAGCCATCACCCGGGTTTTTGAACG
Logfia minima genome assembly, chromosome: 2.
OY992764.1:37832791-37832808
CGTATTCCGTCGCTCCGACACTAAACAGCC37832791GCCGTCGTCATCTTCTACCTCCGATGAAGCTTCTAAAACAATGCCGTC
Triticum timopheevii genome assembly, chromosome: 1At.
OY997261.1:298598751-298598768
TCCTCGCGTCGCCAGTCCCAGAGCTCCGCT298598751GCCGTCGTCATCTTCTACATCATCCTTGGCCGCTGCATCAACCTGAAC
Cenchrus americanus genome assembly, chromosome: Pg5.
OZ001409.1:23744802-23744819
CAGGGCTGCCATCTCCTTCACCCGAGCACC23744802GCCGTCGTCATCTTCTACCTCCGGTCGCTGGCGTCGATCTCCCTCACC
Zea mays subsp. mays genome assembly, chromosome: 8.
OZ119273.1:79742075-79742092
TTCTGGTAGCATGGCAACAACCACAGATGC79742075GCCGTCGTCATCTTCTACATCTTCCTCAATGAAAAGGGTGCAAAGACA
Zea mays subsp. mays genome assembly, chromosome: 6.
OZ119291.1:97942120-97942137
CGTCAGTAGCATGGCAACAACCTCAGATGC97942120GCCGTCGTCATCTTCTACATCTTCCTCAATGAAAAGGGTGCAAAGACG
Zea mays subsp. mays genome assembly, chromosome: 8.
OZ119293.1:84158821-84158838
TTCTGGTAGCATGGCAACAACCACAGATGC84158821GCCGTCGTCATCTTCTACATCTTCCTCAATGAAAAGGGTGCAAAGACA
Geum rivale genome assembly, chromosome: 4.
OZ123681.1:34133667-34133684
TGCCACGTACTCGTGCGGAGGCAGCATCTC34133667GCCGTCGTCATCTTCTACATCGTCGTCCAAGGCCTCCAATTCGTGGAG
Lamium purpureum genome assembly, chromosome: 5.
OZ211120.1:12580129-12580146
GCCGGAGAAGGGCCTTCAAACTCCATTACC12580129GCCGTCGTCATCTTCTACACCGCATCCCCATAGTCCATTACTCCGCCG
Tessaracoccus palaemonis strain J1M15 chromosome, complete genome.
CP079216.1:1412878-1412895
GCCGCCCTGACCGCCGCCCTCGGATTCGCC1412878GCCGTCGTCATCTTCTACAGCATCGGTCAGGCCCTCGAGGTCGTGGCC
Streptomyces sp. cg2 chromosome, complete genome.
CP163523.1:8405492-8405509
CTGGGTCATTACGCTCTGTGGCCGGCCCCG8405492GCCGTCGTCATCTTCTACGTCCTGTCCTCGCTGGCCCTCTCGCCGCGC
Ocypus olens genome assembly, chromosome: 9.
OU343055.1:5604504-5604521
AACCCGTCCATCAGAGTCGGAAGAACTATC5604504GCCGTCGTCATCTTCTACTAATCTCTACTATCATGTTAGATTGGGTTA
Limnoperna fortunei genome assembly, chromosome: 10.
OX104120.1:12509785-12509802
TTCCTTAGAAATATTGTAGCGCTTTCTATG12509785GCCGTCGTCATCTTCTACTTCAACATACATATCTATCGATAATACTCG
Cyphastrea salae genome assembly, chromosome: 10.
OZ077372.1:8420483-8420500
TTTTACCTGGTTGTCTTCTCCCTCAGATGT8420483GCCGTCGTCATCTTCTACCACAAGTTGCCCTTCTTCAAAGCTTGCTTC
Erebia christi genome assembly, chromosome: Z.
OZ182943.1:57824121-57824138
AATGCCACATTAAACTCTTCGTCATCAGCA57824121GCCGTCGTCATCTTCTACCGATCGATGAGGTTTTATTGCTCGATATTT
Lampetra planeri genome assembly, chromosome: 18.
OZ078341.2:12149921-12149938
CAGTACATACATCCTCGTCAAACATTCCTC12149921GCCGTCGTCATCTTCTACCCTATCATCATTCTCACTCACTGATGCTTC
Lampetra fluviatilis genome assembly, chromosome: 18.
OZ078586.2:12123380-12123397
CAGTACATACATCCTCGTCAAACATTCCTC12123380GCCGTCGTCATCTTCTACCCTATCATCATTCTCACTCACTGATGCTTC
Lampetra fluviatilis genome assembly, chromosome: 18.
OZ110925.1:12046335-12046352
CAGTACATACATCCTCGTCAAACATTCCTC12046335GCCGTCGTCATCTTCTACCCTATCATCATTCTCACTCACTGATGCTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCGTCGTCATCTTCTAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCGTCGTCATCTTCTAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.685 | 0.676 | search_plus_done; http://172.18.8.135:50800/match?q=GCCGTCGTCATCTTCTAC&k=0&no_gap=0&offset=0&limit=50
0.824 | 0.138 | search_minus_done; http://172.18.8.135:50800/match?q=GTAGAAGATGACGACGGC&k=0&no_gap=0&offset=0&limit=0
0.824 | 0.000 | cgi_end;

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