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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-17 06:18:03, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CHO_OF6649xm04f1.ab1 CHO_OF6 Nicotiana tabacum genomic 5', genomic survey sequence.
FI061232.1:160-180
ATCCTAAGTATCAGTAAGGAACATAATGTT160GCCTAAACCAAACCCAAAATCAAAATTTAAGAAGCTGAGATGTACGAGATC
Linum usitatissimum chromosome Lu14.
CP027624.1:4344056-4344076
AATTAAAACCGAACCGAATATTATTTTTTT4344056GCCTAAACCAAACCCAAAATCTAAAATCAAAAATAAAAAACCCAAGACCCA
Linum usitatissimum chromosome Lu9.
CP027633.1:6118742-6118762
AATTAAAACCCAACTGAGTATAATTTTTTT6118742GCCTAAACCAAACCCAAAATCTAAAACCAAAAAAAAATCCAAGACCAAAAA
Pseudoscleropodium purum genome assembly, chromosome: 3.
OZ017797.1:22427085-22427105
TAATATAGACATCCAATTCACTCTATCTAT22427085GCCTAAACCAAACCCAAAATCCATAGATTATTGTAATTAACTGTCCCCTCC
Fragaria vesca genome assembly, chromosome: 1.
OZ071055.1:9337607-9337627
TCACTCTTATACATGAATAACAAGACGGCC9337607GCCTAAACCAAACCCAAAATCAGTCACACAAAAAAATGAAGACCCAAAAAC
Fragaria vesca genome assembly, chromosome: 1.
OZ073117.1:9339841-9339861
TCACTCTTATACATGAATAACAAGACGGCC9339841GCCTAAACCAAACCCAAAATCAGTCACACAAAAAAATGAAGACCCAAAAAC
Fragaria moschata genome assembly, chromosome: 1.
OZ076519.1:9507295-9507315
TCACTCTTATACATGAATAACAAGACGGCC9507295GCCTAAACCAAACCCAAAATCAGTCACACAAAAAAATGAAGACCCAAAAAC
Symbiodinium pilosum genome assembly, chromosome: 76.
OZ125813.1:3500903-3500923
AAGCAACGGGACTTAGATTTTCTGGGGGTA3500903GCCTAAACCAAACCCAAAATCCCAAACCCTAGACCCACAACTCTGAATCCT
Fragaria x ananassa cultivar Benihoppe chromosome 24.
CP139752.1:27958017-27958037
TGTTTTTGGGTCTTTAGTTTTTTTGTGACT27958017GATTTTGGGTTTGGTTTAGGCGGCCGTCTTGTTATTCATGTATAAGAGTGA
Fragaria x ananassa cultivar Benihoppe chromosome 23.
CP139753.1:26202383-26202403
TGTTTTTGGGTCTTTAGTTTTGTTGTGACT26202383GATTTTGGGTTTGGTTTAGGCGGCCGTCTTGTTAATTGTTATTCATGTATA
Fragaria x ananassa cultivar Benihoppe chromosome 22.
CP139754.1:27943742-27943762
TGTTTTTGGGTCTTCAGTTTTTGTGTGACT27943742GATTTTGGGTTTGGTTTAGGCGGCCGTCTTGTTATTCATGTATTAGAGTGA
Fragaria vesca clone CFVCT017 microsatellite sequence.
DQ117024.1:319-339
GTTTTTGGGTCTTCATTTTTTTGTGTGACT319GATTTTGGGTTTGGTTTAGGCGGCCGTCTTGTTATTCATGTATAAGAGTGA
Tamarix gallica genome assembly, chromosome: 3.
OZ123703.1:82382854-82382874
AATGTTTTAGGGTTTCAGTTTTAGTATAGA82382854GATTTTGGGTTTGGTTTAGGCACAAAATAGAGTATGAATTTGATGGTAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCTAAACCAAACCCAAAATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCTAAACCAAACCCAAAATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.260 | 0.251 | search_plus_done; http://172.18.8.135:50800/match?q=GCCTAAACCAAACCCAAAATC&k=0&no_gap=0&offset=0&limit=50
0.365 | 0.105 | search_minus_done; http://172.18.8.135:50800/match?q=GATTTTGGGTTTGGTTTAGGC&k=0&no_gap=0&offset=0&limit=42
0.369 | 0.004 | cgi_end;

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