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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 06:13:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:124962178-124962197
TAAAAAAAAGTGAACCGCCTCGTTATATTT124962178GCCTCAGTCATGCATTGAAATGTGAAGACTTGGGAAGATTTTGAGCTCCT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:125802306-125802325
AAAAAAAAAGTGAACCGCCTCGTTATATTT125802306GCCTCAGTCATGCATTGAAATGTGAAGACTTGGGAAGATTTTGAGCTCCT
KS24060H07 KS24 Capsicum annuum cDNA, mRNA sequence.
GD123510.1:345-364
AGGAGCTCAAAATCTTCCCAAGTCTTCACA345TTTCAATGCATGACTGAGGCAAATATAACGAGGCGGTTCACTTTTTTTTT
TSA: Capsicum annuum MGMT_Contig40179 mRNA sequence.
JW090423.1:558-577
AGGAGCTCAAAATCTTCCCAAGTCTTCACA558TTTCAATGCATGACTGAGGCAAATATAACGAGGCGGTTCACTTTTTTTTT
Pinctada fucata DNA, chromosome 1, nearly complete sequence, Principal Pseudohaplotype.
AP027102.1:42328536-42328555
CCAACATGAAGCATATTGTAAGTATCTATT42328536TTTCAATGCATGACTGAGGCCATTTGAATACTTAAAGTCATAACGATTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCTCAGTCATGCATTGAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCTCAGTCATGCATTGAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.350 | 0.341 | search_plus_done; http://172.18.8.135:50400/match?q=GCCTCAGTCATGCATTGAAA&k=0&no_gap=0&offset=0&limit=50
0.552 | 0.203 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCAATGCATGACTGAGGC&k=0&no_gap=0&offset=0&limit=48
0.554 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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