GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-04 05:50:36, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Prunus dulcis DNA, pseudomolecule Pd03.
AP019299.1:3380765-3380785
AAGAGTTCTGTAGTGTAGGCGATGATTCTT3380765GCCTCATACTGTGGGATACAAGAGCTGGCTCTAGTCCAGTTGTCAAGGTTC
Prunus speciosa IZO01 DNA, chromosome 3, sequence.
AP029591.1:3804243-3804263
AAGAGTTCTGTAGTGTAGGCGATGATTCTT3804243GCCTCATACTGTGGGATACAAGAGCTGGCTCTAGTCCAGTTGTCAAGGTTC
Prunus speciosa IZO01 DNA, chromosome 3.
AP038357.1:3531934-3531954
AAGAGTTCTGTAGTGTAGGCGATGATTCTT3531934GCCTCATACTGTGGGATACAAGAGCTGGCTCTAGTCCAGTTGTCAAGGTTC
Prunus speciosa IZO01 DNA, chromosome 3.
AP038365.1:3731317-3731337
AAGAGTTCTGTAGTGTAGGCGATGATTCTT3731317GCCTCATACTGTGGGATACAAGAGCTGGCTCTAGTCCAGTTGTCAAGGTTC
Prunus dulcis genome assembly, chromosome: 3.
OZ022199.1:3519495-3519515
AAGAGTTCTGTAGTGTAGGCGATGATTCTT3519495GCCTCATACTGTGGGATACAAGAGCTGGCTCTAGTCCAGTTGTCAAGGTTC
Prunus dulcis genome assembly, chromosome: 3.
OZ022208.1:3620994-3621014
AAGAGTTCTGTAGTGTAGGCGATGATTCTT3620994GCCTCATACTGTGGGATACAAGAGCTGGCTCTAGTCCAGTTGTCAAGGTTC
Prunus armeniaca genome assembly, chromosome: 3.
OZ046362.2:3893164-3893184
AAGAGTTCTGTAGTGTAGGCGATGATTCTT3893164GCCTCATACTGTGGGATACAAGAGCTGGCTCTAGTCCAGTTGTCAAGGTTC
Prunus padus genome assembly, chromosome: 9.
OZ060519.1:3566735-3566755
AAGAGTTCTGTAGTGTAGGCGATGATTCTT3566735GCCTCATACTGTGGGATACAAGAGCTGGCTCTAGTCCAGTTGTCAAGGTTC
Prunus armeniaca genome assembly, chromosome: 3.
OZ177839.1:3644882-3644902
AAGAGTTCTGTAGTGTAGGCGATGATTCTT3644882GCCTCATACTGTGGGATACAAGAGCTGGCTCTAGTCCAGTTGTCAAGGTTC
Prunus brigantina genome assembly, chromosome: 3.
OZ184544.1:3571187-3571207
AAGAGTTCTGTAGTGTAGGTGATGATTCTT3571187GCCTCATACTGTGGGATACAAGAGCTGGCTCTAGTCCAGTTGTCAAGGTTC
Prunus padus genome assembly, chromosome: 6.
OZ060516.1:23270368-23270388
GAACCTTGACAACTGGACTAGAGCCAGCTC23270368TTGTATCCCACAGTATGAGGCAAGAATCATCGCCTACACTACAGAACTCTT
Prunus ramburei genome assembly, chromosome: 4.
OZ234813.1:32202994-32203014
GAACCTTGACAACTGGACTAGAGCCAGCTC32202994TTGTATCCCACAGTATGAGGCAAGAATCATCACCTACACTACAGAACTCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCTCATACTGTGGGATACAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCTCATACTGTGGGATACAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.280 | 0.271 | search_plus_done; http://172.18.8.135:50900/match?q=GCCTCATACTGTGGGATACAA&k=0&no_gap=0&offset=0&limit=50
0.460 | 0.180 | search_minus_done; http://172.18.8.135:50900/match?q=TTGTATCCCACAGTATGAGGC&k=0&no_gap=0&offset=0&limit=40
0.462 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).