GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 07:32:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Callithrix jacchus mRNA, clone: MTE-015G12, 5'end sequence, expressed in testis.
HX596647.1:617-636
TGTATTCCCAATTCAGGCAGCTCAGCAGTG617GCCTGTGATTCCAGCAATTGAAATAGCTGACATCCATGAAGCTTTTTCTG
Arvicola amphibius genome assembly, chromosome: 14.
LR862394.1:16243057-16243076
GCCTACAGCAATTCCCTTTTATCAAGTTCC16243057CAATTGCTGGAATCACAGGCATGATCCCTGATACCTGGTTAGACATAAAC
Blennius ocellaris genome assembly, chromosome: 4.
OY730204.1:11821147-11821166
TTTAGTCAAGGAGTAAGATTTTGAAGAAGA11821147CAATTGCTGGAATCACAGGCAGCCAGTGCAGAGATTGAAGCGCAGCTGTA
Butyrivibrio fibrisolvens 16/4 draft genome.
FP929036.1:1194191-1194210
CAGATTTCTGGCAGTATTCTTCAAAAGAGA1194191CAATTGCTGGAATCACAGGCTATGTAGATGTAAACGTAGCTAGAAAAACC
Butyrivibrio fibrisolvens isolate MGYG-HGUT-02531 genome assembly, chromosome: 1.
LR699013.1:1194191-1194210
CAGATTTCTGGCAGTATTCTTCAAAAGAGA1194191CAATTGCTGGAATCACAGGCTATGTAGATGTAAACGTAGCTAGAAAAACC
Tromatobia lineatoria genome assembly, chromosome: 15.
OX453048.1:13622093-13622112
CAACCCAGTGAGCATCCACCTCAGAGGTTC13622093CAATTGCTGGAATCACAGGCTGATCCTCAAGCTTATTACTATGTCCAGGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCCTGTGATTCCAGCAATTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCTGTGATTCCAGCAATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.184 | 0.175 | search_plus_done; http://172.18.8.135:50400/match?q=GCCTGTGATTCCAGCAATTG&k=0&no_gap=0&offset=0&limit=50
0.208 | 0.024 | search_minus_done; http://172.18.8.135:50400/match?q=CAATTGCTGGAATCACAGGC&k=0&no_gap=0&offset=0&limit=49
0.212 | 0.004 | cgi_end;

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