GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 14:28:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Euphorbia fischeriana EFI_002074 mRNA sequence.
JL055101.1:1695-1717
TGATTTTGGTATTCTTTATGGTTTTCAATG1695GCCTTGCCTTATTCAGCGTCTCTCATCCAGGCCTGGCGGACCTCCCAAACTTC
TSA: Hevea brasiliensis contig50648, mRNA sequence.
JT917246.1:1829-1851
TGATTTTGGTATTCTTTATGGTTTCCAATG1829GCCTTGCCTTATTCAGCGTCTCTCATCTAGGCCTGGTGGACCTCCCAAGCTTC
Euphorbia peplus chromosome 1.
CP110837.1:25819258-25819280
CGATTTCGGTATTCTATATGGTTTCCAATG25819258GCCTTGCCTTATTCAGCGTCTCTCATCCAGGCCGGGTGGACCTCCAAAACTTC
Mercurialis annua genome assembly, chromosome: LG8.
OW569318.1:39767487-39767509
TGATTTTGGTATTCTTTACGGATTCCAATG39767487GCCTTGCCTTATTCAGCGTCTCTCTTCCATGCCTGGTGGACCTCCCAAGTTGC
Hedera helix genome assembly, chromosome: 15.
OX359278.1:36070367-36070389
TGATTTTGGGATTCTTTATGGTTTCCAATG36070367GCCTTGCCTTATTCAGCGTCTCTCATCTAGACCAGGTGGGCCTCCCAAACTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCCTTGCCTTATTCAGCGTCTCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCTTGCCTTATTCAGCGTCTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.120 | 0.111 | search_plus_done; http://172.18.8.135:50400/match?q=GCCTTGCCTTATTCAGCGTCTCT&k=0&no_gap=0&offset=0&limit=50
0.139 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=AGAGACGCTGAATAAGGCAAGGC&k=0&no_gap=0&offset=0&limit=45
0.139 | 0.000 | cgi_end;

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