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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:23:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-39199 Leaf Coffea canephora cDNA clone cccl31i13 5', mRNA sequence.
DV694624.1:330-353
CAGGCATGTACTCGTGCCATAGTACTAGTA330GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
CC-L01_036_A10 Coffea young leaves Coffea canephora cDNA clone CC-L01_036_A10, mRNA sequence.
EE194305.1:269-292
GCATGTACTCGTGCCATAGTACTAGTAGTA269GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
CC-F01_007_G12 Cherry of different development stage Coffea canephora cDNA clone CC-F01_007_G12, mRNA sequence.
EE197025.1:285-308
GCATGTACTCGTGCCATAGTACTAGTAGTA285GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
CC-F01_011_M02 Cherry of different development stage Coffea canephora cDNA clone CC-F01_011_M02, mRNA sequence.
EE198162.1:320-343
GCATGTACTCGTGCCATAGTACTAGTAGTA320GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
CC-F01_015_K17 Cherry of different development stage Coffea canephora cDNA clone CC-F01_015_K17, mRNA sequence.
EE199277.1:28-51
TGTACTCGTGCCATAGTACTAGTAGTA28GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
TransId-210101 CACATN1 Coffea arabica cDNA clone CACATN1-3256TV similar to F3H9.20 protein - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT001442.1:226-249
CAGGCATGTACTCGTGCCACAGTACTAGTA226GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
TransId-207523 CACATN1 Coffea arabica cDNA clone CACATN1-2723TV similar to F3H9.20 protein - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT002536.1:423-446
CAGGCATGTACTCGTGCCACAGTACTAGTA423GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
TransId-270825 CarCatLeEnri2 Coffea arabica cDNA clone CarCatLeEnri2_25-D02-PAL17d similar to F3H9.20 protein - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT017227.1:344-367
CAGGCATGTACTCGTGCCACAGTACTACTA344GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
CC00-XX-EC1-021-B05-EC.F Coffea canephora EC1 Coffea canephora cDNA clone CC00-XX-EC1-021-B05-EC, mRNA sequence.
GT656609.1:335-358
GCATGTACTCGTGCCATAGTACTAGTAGTA335GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
CA00-XX-RM1-033-B04-EP.F Coffea arabica RM1 Coffea arabica cDNA clone CA00-XX-RM1-033-B04-EP, mRNA sequence.
GT709952.1:272-295
CAGGCATGTACTCGTGCCACAGTACTAGTA272GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
CA00-XX-BP1-008-G07-JM.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-008-G07-JM, mRNA sequence.
GT720985.1:293-316
CAGGCATGTACTCGTGCCACAGTACTAGTA293GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
CA00-XX-BP1-071-A05-EZ.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-071-A05-EZ, mRNA sequence.
GT720986.1:286-309
CAGGCATGTACTCGTGCCACAGTACTAGTA286GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
CA00-XX-BP1-013-B07-JF.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-013-B07-JF, mRNA sequence.
GT720987.1:306-329
CAGGCATGTACTCGTGCCACAGTACTAGTA306GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
CA00-XX-EA1-002-C04-EC.F Coffea arabica EA1 Coffea arabica cDNA clone CA00-XX-EA1-002-C04-EC, mRNA sequence.
GT725248.1:41-64
CAGGCATGTACTCGTGCCACAGTACTAGTA41GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
CA00-XX-IC1-018-C03-EC.F Coffea arabica IC1 Coffea arabica cDNA clone CA00-XX-IC1-018-C03-EC, mRNA sequence.
GW461830.1:13-36
GTACTAGTAGTA13GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
CA00-XX-LV5-061-F04-SB.F Coffea arabica LV5 Coffea arabica cDNA clone CA00-XX-LV5-061-F04-SB, mRNA sequence.
GW491122.1:140-163
GCATGTACTCGTGCCATAGTACTAGTAGTA140GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCGGTTGATCCTCCTG
CA00-XX-LV5-051-D02-AB.F Coffea arabica LV5 Coffea arabica cDNA clone CA00-XX-LV5-051-D02-AB, mRNA sequence.
GW492500.1:371-394
CAGGCATGTACTCGTGCCACAGTACTAGTA371GTAGTAGTTTGTCAGCCTTGTCGCCGTTGTTGGTTAACTCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCGACAAGGCTGACAAACTACTAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCGACAAGGCTGACAAACTACTAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.176 | 0.168 | search_plus_done; http://172.18.8.135:50400/match?q=GCGACAAGGCTGACAAACTACTAC&k=0&no_gap=0&offset=0&limit=50
1.738 | 1.561 | search_minus_done; http://172.18.8.135:50400/match?q=GTAGTAGTTTGTCAGCCTTGTCGC&k=0&no_gap=0&offset=0&limit=50
1.749 | 0.011 | cgi_end;

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