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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:51:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-39523 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w12i11 5', mRNA sequence.
DV694858.1:247-269
CAATACTTGTGCTGATTATTTAGCTTAGCT247GCGACCGGACGACCAAAAATAATTTAATTAAGAAACGATGAGCTTGTCTCTCC
CGN-49412 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w27n16 5', mRNA sequence.
DV702939.1:269-291
CAATACTTGTGCTGATTATTTAGCTTAGCT269GCGACCGGACGACCAAAAATAATTTAATTAAGAAACGATGAGCTTGTCTCTCC
TransId-230995 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEVO95TV similar to AT5g64160/MHJ24_14 - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT005882.1:62-84
CAATACTTGTGCTGATTATTTAGCTTAGCT62GCGACCGGACGACCAAAAATAATTTAATTAAGAAACGATGAGCTTGTCTCTCC
CA00-XX-LV8-084-H09-MC.F Coffea arabica LV8 Coffea arabica cDNA clone CA00-XX-LV8-084-H09-MC, mRNA sequence.
GT701336.1:111-133
CAATACTTGTGCTGATTATTTAGCTTAGCT111GCGACCGGACGACCAAAAATAATTTAATTAAGAAACGATGAGCTTGTCTCTCC
CA00-XX-FB1-065-H03-CE.F Coffea arabica FB1 Coffea arabica cDNA clone CA00-XX-FB1-065-H03-CE, mRNA sequence.
GT709833.1:237-259
CAATACTTGTGCTGATTATTTAGCTTAGCT237GCGACCGGACGACCAAAAATAATTTAATTAAGAAACGATGAGCTTGTCTCTCC
CA00-XX-CS1-063-D12-AC.F Coffea arabica CS1 Coffea arabica cDNA clone CA00-XX-CS1-063-D12-AC, mRNA sequence.
GT725113.1:236-258
CAATACTTGTGCTGATTATTTAGCTTAGCT236GCGACCGGACGACCAAAAATAATTTAATTAAGAAACGATGAGCTTGTCTCTCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCGACCGGACGACCAAAAATAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCGACCGGACGACCAAAAATAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.666 | 0.657 | search_plus_done; http://172.18.8.135:50400/match?q=GCGACCGGACGACCAAAAATAAT&k=0&no_gap=0&offset=0&limit=50
0.760 | 0.094 | search_minus_done; http://172.18.8.135:50400/match?q=ATTATTTTTGGTCGTCCGGTCGC&k=0&no_gap=0&offset=0&limit=44
0.760 | 0.000 | cgi_end;

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