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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-03-25 16:09:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 34254 from patent US 7569389.
GP684639.1:293-312
TCAGAGTCTTCTCACAGAGAAAACAGGAAA293GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTCTTGGGCCTCTCT
sa68c04.y1 Gm-c1004 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1004-4447 5', mRNA sequence.
AI440598.1:139-158
TCAGAGTCTTCTCACAGAGAAAACAGGAAA139GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTCTTGGGCCTCTCT
se64c07.y1 Gm-c1019 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1019-1765 5', mRNA sequence.
AW186153.1:95-114
TCAGAGTCTTCTCACAGAGAAAACAGGAAA95GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTCTTGGGCCTCTCT
so82f09.y1 Gm-c1040 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1040-2178 5', mRNA sequence.
BE330654.1:211-230
TCAGAGTCTTCTCACAGAGAAAACAGGAAA211GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTCTTGGGCCTCTCT
sak12h07.y1 Gm-c1075 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1075-3038 5', mRNA sequence.
BM270441.1:7-26
AGGAAA7GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTCTTGGGCCTCTCT
sal73g07.y1 Gm-c1061 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1061-4910 5', mRNA sequence.
BM732161.1:21-40
CTCACAGAGAAAACAGGAAA21GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTTCCTATTTCTTTC
Gm-r1030-2201 Gm-r1030 Glycine max cDNA clone Gm-r1030-2201 5', mRNA sequence.
CK768948.1:86-105
GTCAGAGTTTCTCACAGAGAAAACAGGAAA86GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTTCCTATTTCTTTC
Glycine max cDNA, clone: GMFL02-28-E19, 5'end.
DB965246.1:69-88
GTCAGAGTTTCTCACAGAGAAAACAGGAAA69GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTTCCTATTTCTTTC
Glycine max cDNA, clone: GMFL02-28-K18, 5'end.
DB965377.1:69-88
GTCAGAGTTTCTCACAGAGAAAACAGGAAA69GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTTCCTATTTCTTTC
Glycine max cDNA, clone: GMFL02-31-M23, 5'end.
DB966509.1:522-541
GTCAGAGTTTCTCACAGAGAAAACAGGAAA522GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTTCCTATTTCTTTC
JGI_ACBU4522.fwd ACBU Phakopsora pachyrhizi infected soybean leaf tissue 6-8 days post inoculation with TW72-1 urediniospores Glycine max cDNA clone ACBU4522 5', mRNA sequence.
EH261139.1:106-125
GTCAGAGTTTCTCACAGAGAAAACAGGAAA106GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTTCCTATTTCTTTC
454GmaGlobSeed48437 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK313805.1:23-42
TTCTCACAGAGAAAACAGGAAA23GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTCCCTATTTCTTTC
454GmaGlobSeed325978 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK591346.1:20-39
GGACAGAGAAAACAGGAAA20GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTTCCTAATTTACTT
454GmaGlobSeed607655 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD865006.1:96-115
TCAGAGTCTTCTCACAGAGAAAACAGGAAA96GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTCTTGGGCCTCTCT
CCCC2136.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC2136 5', mRNA sequence.
GR826303.1:34-53
TCAGAGTCTTCTCACAGAGAAAACAGGAAA34GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTCTTGGGCCTCTCT
CCCC12740.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC12740 5', mRNA sequence.
GR842783.1:46-65
TCAGAGTCTTCTCACAGAGAAAACAGGAAA46GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTCTTGGGCCTCTCT
CCCC9906.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC9906 5', mRNA sequence.
GR853567.1:6-25
GGAAA6GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTCTTGGGCCTCTCT
Vigna angularis mRNA, clone: VES06I24.
HX944555.1:40-59
GTCAGAGTTTCTCACAGAGAAAACAGGAAA40GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTCTTGGGCCTCTCT
Glycine max cultivar Williams 82 chromosome 2.
CP126427.1:45158498-45158517
GTCAGAGTTTCTCACAGAGAAAACAGGAAA45158498GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTTCCTATTTCTTTC
Sphenostylis stenocarpa genome assembly, chromosome: 3.
OY731400.1:102773443-102773462
GTCAGAGTTTCTCACAGAGAAAACAGGAAA102773443GCGAGAACCTTCTTACCCCTTCACCTCTTCTCTCTTTCTTGGGCCTCTCT
GM_WBb0118J01.f GM_WBb Glycine max genomic clone GM_WBb0118J01 5', genomic survey sequence.
ED751795.1:554-573
AGAGAGGCCCAAGACAGAGAGAAGAGGTGA554AGGGGTAAGAAGGTTCTCGCTTTCCTGTTTTCTCTGTGAGAAGACTCTGA
Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
AP015034.1:55018526-55018545
AGAGAGGCCCAAGAAAGAGAGAAGAGGTGA55018526AGGGGTAAGAAGGTTCTCGCTTTCCTGTTTTCTCTGTGAGAAACTCTGAC
Vigna unguiculata cultivar Xiabao 2 chromosome Vu03.
CP039346.1:9767859-9767878
AGAGAGGCCCAAGAAAGAGAGAAGAGGGGA9767859AGGGGTAAGAAGGTTCTCGCTTTCCTGTTTTCTCTGTGAGAAACTCTGAC
Glycine max cultivar Williams 82 chromosome 17.
CP126442.1:5735958-5735977
AGAGAGGCCCAAGAAAGAGAGAAGAGGTGA5735958AGGGGTAAGAAGGTTCTCGCTTTCCTGTTTTCTCTGTGAGAAGACTCTGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCGAGAACCTTCTTACCCCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCGAGAACCTTCTTACCCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.344 | 1.335 | search_plus_done; http://172.18.8.135:50400/match?q=GCGAGAACCTTCTTACCCCT&k=0&no_gap=0&offset=0&limit=50
1.483 | 0.139 | search_minus_done; http://172.18.8.135:50400/match?q=AGGGGTAAGAAGGTTCTCGC&k=0&no_gap=0&offset=0&limit=30
1.485 | 0.003 | cgi_end;

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