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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 09:07:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 3195 from patent US 10975383.
MX542605.1:1077-1096
TTGTGCAACTTCTGAGCCTGACGGTCGTAA1077GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Mdlv2_4023n07.y1 Mdlv2 Malus domestica cDNA clone Mdlv2_4023n07 5' similar to TR:O80526 O80526 F19J9.9 PROTEIN, mRNA sequence.
CV656040.1:390-409
TTGTGCAACTTCTGAGCCTGACGGTCGTAA390GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
000426AFBC003565HT (AFBC) Royal Gala pre-opened floral bud Malus domestica cDNA clone AFBC003565, mRNA sequence.
EB109579.1:233-252
TTGTGCAACTTCTGAGCCTGACGGTCGTAA233GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
000530AEPA004174HT (AEPA) Pinkie expanding leaf Malus domestica cDNA clone AEPA004174, mRNA sequence.
EB111407.1:25-44
AACTTCTGAGCCTGACGGTCGTAA25GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
000531AEPA006157HT (AEPA) Pinkie expanding leaf Malus domestica cDNA clone AEPA006157, mRNA sequence.
EB111615.1:268-287
TTGTGCAACTTCTGAGCCTGACGGTCGTAA268GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
010701AAZA004851HT (AAZA) M9 xylem Malus domestica cDNA clone AAZA004851, mRNA sequence.
EB139490.1:351-370
TTGTGCAACTTCTGAGCCTGACGGTCGTAA351GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
010704AAZA008225HT (AAZA) M9 xylem Malus domestica cDNA clone AAZA008225, mRNA sequence.
EB139984.1:351-370
TTGTGCAACTTCTGAGCCTGACGGTCGTAA351GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
010723ABAB001334HT (ABAB) Pacific Rose spur buds from ON trees Malus domestica cDNA clone ABAB001334, mRNA sequence.
EB142535.1:346-365
TTGTGCAACTTCTGAGCCTGACGGTCGTAA346GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
ff_06E03_AF4 Md_fruit-fruit_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD254798.1:12-31
GACGGTCGTAA12GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Mdfwb2091O18.g1 Apple_EST_Mdfwb Malus domestica cDNA 5' similar to emb|CAC86996.1| ATP citrate lyase b-subunit [Lupinus albus], mRNA sequence.
GO507575.1:674-693
TTGTGCAACTTCTGAGCCTGACGGTCGTAA674GCGAGCCCTTGTAATAGGAGGAGGTATTGCTTACTTTACCGATGTTGCTG
Mdfrs3138H09.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to ref|NP_172414.1| expressed protein [Arabidopsis thaliana] pir|F86227 hypothetical protein [imported] - Arabidopsis thaliana gb|AAC332
GO520283.1:44-63
TTGTGCAACTTCTGAGCCTGACGGTCGTAA44GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Mdltb7520D05.g1 Apple_EST_Mdltb Malus domestica cDNA 5' similar to emb|CAC86996.1| ATP citrate lyase b-subunit [Lupinus albus], mRNA sequence.
GO532641.1:403-422
TTGTGCAACTTCTGAGCCTGACGGTCGTAA403GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Mdfrfu3511E17.g1 Apple_EST_Mdfrfu Malus domestica cDNA 5' similar to emb|CAC86996.1| ATP citrate lyase b-subunit [Lupinus albus], mRNA sequence.
GO535228.1:318-337
TTGTGCAACTTCTGAGCCTGACGGTCGTAA318GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Mdfrfu3512I16.g1 Apple_EST_Mdfrfu Malus domestica cDNA 5' similar to emb|CAC86996.1| ATP citrate lyase b-subunit [Lupinus albus], mRNA sequence.
GO535440.1:435-454
TTGTGCAACTTCTGAGCCTGACGGTCGTAA435GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141922.1:6013608-6013627
GTGTGCAACATCTGAGCCTGACGGTCGTAA6013608GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141939.1:6312254-6312273
GTGTGCAACTTCTGAGCCTGACGGTCGTAA6312254GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143370.1:6441328-6441347
GTGTGCAACTTCTGAGCCTGACGGTCGTAA6441328GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Malus sylvestris genome assembly, chromosome: 13.
OU696515.1:6334307-6334326
GTGTGCAACTTCTGAGCCTGACGGTCGTAA6334307GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Malus domestica genome assembly, chromosome: 13.
OU696689.1:6527367-6527386
GTGTGCAACTTCTGAGCCTGACGGTCGTAA6527367GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Malus domestica genome assembly, chromosome: 13.
OU744554.1:6340807-6340826
GTGTGCAACTTCTGAGCCTGACGGTCGTAA6340807GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Malus domestica genome assembly, chromosome: 13.
OU744965.1:6386825-6386844
GTGTGCAACTTCTGAGCCTGACGGTCGTAA6386825GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Malus domestica genome assembly, chromosome: 13.
OU745003.1:6172245-6172264
GTGTGCAACTTCTGAGCCTGACGGTCGTAA6172245GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Malus x robusta genome assembly, chromosome: 9.
OY720333.1:6269870-6269889
GTGTGCAACTTCTGAGCCTGACGGTCGTAA6269870GCGAGCCCTTGTAATAGGAGGAGGTATTGCTAACTTTACCGATGTTGCTG
Mdlr7008L21.g1 Apple_EST_Mdlr Malus domestica cDNA similar to ref|NP_172414.1| expressed protein [Arabidopsis thaliana] pir|F86227 hypothetical protein [imported] - Arabidopsis thaliana gb|AAC33203.1|
DR991596.1:480-499
CAGCAACATCGGTAAAGTTAGCAATACCTC480CTCCTATTACAAGGGCTCGCTTACGACCGTCAGGCTCAGAAGTTGCACAA
010615AVBC003026HT (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC003026, mRNA sequence.
EB126966.1:489-508
CAGCAACATCGGTAAAGTTAGCAATACCTC489CTCCTATTACAAGGGCTCGCTTACGACCGTCAGGCTCAGAAGTTGCACAA
Mdfb8005L24_e3685.b1 Apple_EST_Mdfb Malus domestica cDNA 3' similar to ref|NP_172414.1| expressed protein [Arabidopsis thaliana] pir|F86227 hypothetical protein [imported] - Arabidopsis thaliana gb|AA
GO546259.1:502-521
CAGCAACATCGGTAAAGTTAGCAATACCTC502CTCCTATTACAAGGGCTCGCTTACGACCGTCAGGCTCAGAAGTTGCACAA
Mdfrs3142I16_e8031.b1 Apple_EST_Mdfrs Malus domestica cDNA 3' similar to ref|NP_172414.1| expressed protein [Arabidopsis thaliana] pir|F86227 hypothetical protein [imported] - Arabidopsis thaliana gb|
GO567647.1:464-483
CAGCAACATCGGTAAAGTTAGCAATACCTC464CTCCTATTACAAGGGCTCGCTTACGACCGTCAGGCTCAGAAGTTGCACAA
A06_AAF Apple Root SSH library AAF Malus domestica cDNA, mRNA sequence.
JZ704948.1:348-367
CAGCAACATCGGTAAAGTTAGCAATACCTC348CTCCTATTACAAGGGCTCGCTTACGACCGTCAGGCTCAGAAGTTGCACAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCGAGCCCTTGTAATAGGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCGAGCCCTTGTAATAGGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.166 | 1.157 | search_plus_done; http://172.18.8.135:50400/match?q=GCGAGCCCTTGTAATAGGAG&k=0&no_gap=0&offset=0&limit=50
1.693 | 0.527 | search_minus_done; http://172.18.8.135:50400/match?q=CTCCTATTACAAGGGCTCGC&k=0&no_gap=0&offset=0&limit=27
1.697 | 0.004 | cgi_end;

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