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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-11 23:17:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Scophthalmus maximus chromosome 1.
CP026243.1:27188294-27188313
ACCTCAGGATTAATGTGTTTTTGGCAACAT27188294GCGATTTCTTCCTCTCCTCCTCCTCCTCCTCCTGGCGGGCATCTCACGTT
Gymnoscopelus microlampas genome assembly, chromosome: 18.
OY732720.1:36409585-36409604
AGTTCTTCTTCTGAGAGGGAAGACATTGAT36409585GCGATTTCTTCCTCTCCTCCTCCCAAAACCCTCTTGAATTCCTCTTCTTC
Arachis hypogaea DNA, clone: AHGS40O23.
DH961591.1:62-81
GATGGCGGCGATGGAGCCCAACACGCCAGC62GCGATTTCTTCCTCTCCTCCTCTTCTTCTCCGTGGTCCCTTCCCCTTTTC
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:105376503-105376522
GATGGCGGCGGTGGAGCCCAGCACGCCGGC105376503GCGATTTCTTCCTCTCCTCCTCCCCTTCTCCGCGGTCCCTTCCTCTGTTT
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:105422464-105422483
GATGGCGGCGATGGAGCCCAACACGCCAGC105422464GCGATTTCTTCCTCTCCTCCTCTTCTTCTCCGTGGTCCCTTCCCCTTTTC
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:103046185-103046204
GATGGCGGCGGTGGAGCCCAGCACGCCGGC103046185GCGATTTCTTCCTCTCCTCCTCCCCTTCTCCGCGGTCCCTTCCTCTGTTT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:103092134-103092153
GATGGCGGCGATGGAGCCCAACACGCCAGC103092134GCGATTTCTTCCTCTCCTCCTCTTCTTCTCCGTGGTCCCTTCCCCTTTTC
Scophthalmus maximus genome assembly, chromosome: 1.
OY978252.1:4556107-4556126
AACGTGAGATGCCCGCCAGGAGGAGGAGGA4556107GGAGGAGAGGAAGAAATCGCATGTTGCCAAAAACACATTAATCCTGAGGT
ZCY111D03.F ZCY Panicum hallii genomic 5', genomic survey sequence.
KO640036.1:723-742
TAGGAACTAGCGAGGATGCGACGGTCTGAT723GGAGGAGAGGAAGAAATCGCACGGTGTATGCAGGACGTGCAACTTGATGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCGATTTCTTCCTCTCCTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCGATTTCTTCCTCTCCTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.397 | 0.388 | search_plus_done; http://172.18.8.135:50400/match?q=GCGATTTCTTCCTCTCCTCC&k=0&no_gap=0&offset=0&limit=50
0.575 | 0.177 | search_minus_done; http://172.18.8.135:50400/match?q=GGAGGAGAGGAAGAAATCGC&k=0&no_gap=0&offset=0&limit=43
0.576 | 0.001 | cgi_end;

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