GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:01:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Paenarthrobacter sp. YJN-5 chromosome, complete genome.
CP053544.1:2669531-2669548
CCCCCCAACAAGTACGCGCCGCCGCCGCAC2669531GCGCACTGGAAGAGGGATACACCCACTACTCGCCGTTGCTCGGCGAGC
Capitulum mitella isolate CP1-10 chromosome 14.
CP099852.1:14534962-14534979
TTCCTGTAATTTCGATCGAAGGCTTAACAC14534962GCGCACTGGAAGAGGGATCTTTTTGTGCCCCCCTCCACCTGTTTTTTT
Caprimulgus europaeus genome assembly, chromosome: 1.
OU015523.1:58393765-58393782
GCACCCAGCAGCTGTAAGAACGTTGACTGC58393765ATCCCTCTTCCAGTGCGCACAGATTCACCGCTGAGCTCCAGCACCCGG
Paenarthrobacter ureafaciens strain CZY1 chromosome, complete genome.
CP068013.1:2011929-2011946
GCTCGCCGAGCAACGGCGAGTAGTGGGTGT2011929ATCCCTCTTCCAGTGCGCGTGCGGCGGCGGCGCGTACTTGTTGGGGGG
Neisseria sp. Dent CA1/247 chromosome, complete genome.
CP091522.1:1024642-1024659
GGGCTTCAAGCCGGTCAACCCGCGCAATCA1024642ATCCCTCTTCCAGTGCGCGTTTGGCGGTGTGGTCGTAGCGGGCGATGG
Paenarthrobacter ureafaciens strain AT chromosome, complete genome.
CP094489.1:1905113-1905130
GCTCGCCGAGCAACGGCGAGTAGTGGGTGT1905113ATCCCTCTTCCAGTGCGCGTGCGGCGGCGGCGCGTACTTGTTGGGGGG
Paenarthrobacter ureafaciens strain L-1 chromosome, complete genome.
CP119413.1:2853903-2853920
GCTCGCCGAGCAACGGCGAGTAGTGGGTGT2853903ATCCCTCTTCCAGTGCGCGTGCGGCGGCGGCGCGTACTTGTTGGGGGG
Telluria mixta strain ACM 1762 chromosome, complete genome.
CP119520.1:29625-29642
ACCAAGGCCGCAGTGCTCGTTCCCCGATCC29625ATCCCTCTTCCAGTGCGCCTGCTGACGAGGCGCTTTGTCGATTTTTGG
Neisseria zoodegmatis strain NCTC12230 genome assembly, chromosome: 1.
LT906434.1:1239244-1239261
GGGCTTCAAGCCGGTCAACCCGCGCAATCA1239244ATCCCTCTTCCAGTGCGCGTTTGGCGGTGTGGTCGTAGCGGGCGATGG
Siphlonurus alternatus genome assembly, chromosome: X.
OX463788.1:50292365-50292382
ATTAGGGACATTTTCATGTTAATTAAGAAT50292365ATCCCTCTTCCAGTGCGCTTGGAGAACCTCGTCGTAATTGGCGGTTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCGCACTGGAAGAGGGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCGCACTGGAAGAGGGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.136 | 0.127 | search_plus_done; http://172.18.8.135:50400/match?q=GCGCACTGGAAGAGGGAT&k=0&no_gap=0&offset=0&limit=50
0.242 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=ATCCCTCTTCCAGTGCGC&k=0&no_gap=0&offset=0&limit=48
0.247 | 0.005 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).