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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 03:19:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Royalty chromosome 17.
CP141969.1:33320045-33320064
TTTTTTTATTTTAATTAACGGCACTAGTGT33320045GCGCGATAGAGGATTAGACGAGCAGAACTAGGCAGATTTTGACCTATGAA
Malus hybrid cultivar cultivar Royalty chromosome 17.
CP141986.1:34166843-34166862
TTTTTTTATTTTAATTAACGGCACTAGTGT34166843GCGCGATAGAGGATTAGACGAGCAGAACTAGGCAGATTTTGACCTATGAA
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143374.1:33654342-33654361
TTTTTTTATTTTAATTAACGGCACTAGTGT33654342GCGCGATAGAGGATTAGACGAGCAGAACTAGGCAGATTTTGACCTATGAA
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143391.1:31222463-31222482
GTTTTTTATTTTAATTAACGGCACTAGTGT31222463GCGCGATAGAGGATTAGACGAGCGAACTAGGCAGATTTTGACCTATGAAA
Malus domestica genome assembly, chromosome: 17.
OU696693.1:33523870-33523889
TTTTTTTATTTTAATTAACGGCACTAGTGT33523870GCGCGATAGAGGATTAGACGAGCAGAACTAGGCAGATTTTGACCTATGAA
Malus domestica genome assembly, chromosome: 17.
OU744558.1:34240641-34240660
TATTTTTATTTTAATTAACGGCACTAGTGT34240641GCGCGATAGAGGATTAGACGAGCAGAACTAGGCAGATTTTGACCTATGAA
Malus domestica genome assembly, chromosome: 17.
OU744969.1:33249264-33249283
TTTTTTTATTTTAATTAACGGCACTAGTGT33249264GCGCGATAGAGGATTAGACGAGCAGAACTAGGCAGATTTTGACCTATGAA
Malus domestica genome assembly, chromosome: 17.
OU745007.1:33399670-33399689
TTTTTTTATTTTAATTAACGGCACTAGTGT33399670GCGCGATAGAGGATTAGACGAGCAGAACTAGGCAGATTTTGACCTATGAA
Malus hybrid cultivar cultivar Flame chromosome 17.
CP141926.1:528922-528941
TTCATAGGTCAAAATCTGCCTAGTTCTGCT528922CGTCTAATCCTCTATCGCGCACACTAGTGCCGTTAATTAAAATAAAAAAA
Malus hybrid cultivar cultivar Flame chromosome 17.
CP141943.1:611427-611446
TTCATAGGTCAAAATCTGCCTAGTTCTGCT611427CGTCTAATCCTCTATCGCGCACACTAGTGCCGTTAATTAAAATAAAAAAA
Malus x robusta genome assembly, chromosome: 11.
OY720335.1:606707-606726
TTCATAGGTCAAAATCTGCCTAGTTCTGCT606707CGTCTAATCCTCTATCGCGCACACTAGTGCCGTTAATTAAAATAAAAAAA
Pyrus communis genome assembly, chromosome: 11.
OY757078.1:514551-514570
AACATAGGTAAAAATCTGCGTAGTTCTGCT514551CGTCTAATCCTCTATCGCGCACATTAGTGCCGTTAATTAAGATAAAAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCGCGATAGAGGATTAGACG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCGCGATAGAGGATTAGACG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.545 | 0.536 | search_plus_done; http://172.18.8.135:50400/match?q=GCGCGATAGAGGATTAGACG&k=0&no_gap=0&offset=0&limit=50
0.646 | 0.101 | search_minus_done; http://172.18.8.135:50400/match?q=CGTCTAATCCTCTATCGCGC&k=0&no_gap=0&offset=0&limit=42
0.649 | 0.003 | cgi_end;

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