GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-14 21:22:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

sas80h02.y1 Gm-c1036 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1036-10708 5' similar to TR:Q9SAB5 Q9SAB5 F25C20.23, mRNA sequence.
BU761863.1:194-213
CCAACTGAGCCAACTCGTTCACCATCGAAC194GCGCTTCTTCCTCTTCCTCTTCCTCTCCTTCTTCTTCTTCTTCTTCTTCT
LJNC172TF JCVI-LJ3 Lotus japonicus cDNA 5', mRNA sequence.
GO035927.1:234-253
GGCGCATACCCACTTTCACTCGCGCCATGT234GCGCTTCTTCCTCTTCCTCTTCCTCTTTTGGTTCTCGCCTCGAAGATACC
Strongylocentrotus purpuratus clone R3-3017J16, WORKING DRAFT SEQUENCE, 25 unordered pieces.
AC168647.2:83533-83552
TTTTTCTCTTTTTGGTGCCGAAGTGTCCCG83533GCGCTTCTTCCTCTTCCTCTCTGGGCCTGTGGTCGTTGAAAGCCAACTCA
Strongylocentrotus purpuratus clone R3-3017B17, WORKING DRAFT SEQUENCE, 27 unordered pieces.
AC168653.2:82566-82585
TTTTTCTCTTTTTGGTGCCGAAGTGTCCCG82566GCGCTTCTTCCTCTTCCTCTCTGGGCCTGTGGTCGTTGAAAGCCAACTCA
Strongylocentrotus purpuratus clone R3-3011H11, WORKING DRAFT SEQUENCE, 29 unordered pieces.
AC180470.1:109955-109974
TTTTTCTCTTTTTGGTGCCGAAGTGTCCCG109955GCGCTTCTTCCTCTTCCTCTCTGGGCCTGTGGTCGTTGAAAGCCAACTCA
Marchantia polymorpha genomic DNA, chromosome Y, contig B, WORKING DRAFT SEQUENCE, 28 partially ordered pieces.
AP009096.1:1875637-1875656
TCGTCTTTGGCCTTTCTTCTTTGCTGCCCC1875637GCGCTTCTTCCTCTTCCTCTCCTCCTCCGACGAGGAGATGTCGTCTTCTT
Marchantia polymorpha subsp. ruderalis Tak-1 DNA, chromosome: 3.
AP019868.1:13434711-13434730
TCGTCTTTGGCCTTTCTTCTTTGCTGCCCC13434711GCGCTTCTTCCTCTTCCTCTCCTCCTCCGACGAGGAGGTCTCCTCTTCTT
Marchantia polymorpha subsp. ruderalis Tak-1 DNA, chromosome: 4.
AP019869.1:20681290-20681309
AGGTTGCAGGCCTTTCTTCTTTGCTGCCCC20681290GCGCTTCTTCCTCTTCCTCTCCTCCTCCGACAAGGAGGTCTCCTCTTCTT
Trichoderma asperellum strain FT101 chromosome 3.
CP084945.1:2393427-2393446
CTTCTACTTCGCCGTCATCCACTTCTTCTT2393427GCGCTTCTTCCTCTTCCTCTTCCTCTCCCTCTACTTCGTCTTCAGCTTGA
Nigrospora oryzae linkage group LG3.
CP096783.1:1376788-1376807
TGCGGTTGGCCGGCAGTATCGCCCGCCCGA1376788GCGCTTCTTCCTCTTCCTCTCCTCCTTCCACCGCTGGCCGACCGCTCGTC
Phytophthora agathidicida strain 3770 chromosome 5.
CP106975.1:5082337-5082356
CACTTCTCAATCTCCCCGCCAGCCCCAAGA5082337GCGCTTCTTCCTCTTCCTCTCCTATTTGCAAGGGCCAGTTTGATATACAG
Exserohilum rostratum strain LWI chromosome 16.
CP111166.1:300054-300073
CGAGAGGTGGAAAGTACGGTCGAGCCTCTT300054GCGCTTCTTCCTCTTCCTCTTCTTCCTCCTGGGCCTGCTCAGGTTCGTCT
Brassica rapa BrabHLH211 gene for Unknown.
LR756748.1:209-228
CAGGCGAACCATCTACCATCGGACATTCCG209GCGCTTCTTCCTCTTCCTCTTCTTTGTTCCGACACAGAAGCTCTCCGGCT
Brassica napus BnabHLH114 gene for Unknown.
LR757170.1:209-228
CAGGCGAACCATCTACCATCGGACATTCCG209GCGCTTCTTCCTCTTCCTCTTCTTTGTTCCGACACAGAAGCTCTCCGGCT
Brassica rapa BrabHLH211 gene for Unknown.
LR757707.1:209-228
CAGGCGAACCATCTACCATCGGACATTCCG209GCGCTTCTTCCTCTTCCTCTTCTTTGTTCCGACACAGAAGCTCTCCGGCT
Brassica napus BnabHLH114 gene for Unknown.
LR758393.1:209-228
CAGGCGAACCATCTACCATCGGACATTCCG209GCGCTTCTTCCTCTTCCTCTTCTTTGTTCCGACACAGAAGCTCTCCGGCT
Brassica rapa BrabHLH211 gene for Unknown.
LR758930.1:209-228
CAGGCGAACCATCTACCATCGGACATTCCG209GCGCTTCTTCCTCTTCCTCTTCTTTGTTCCGACACAGAAGCTCTCCGGCT
Brassica napus BnabHLH114 gene for Unknown.
LR759352.1:209-228
CAGGCGAACCATCTACCATCGGACATTCCG209GCGCTTCTTCCTCTTCCTCTTCTTTGTTCCGACACAGAAGCTCTCCGGCT
Brassica rapa BrabHLH211 gene for Unknown.
LR759889.1:209-228
CAGGCGAACCATCTACCATCGGACATTCCG209GCGCTTCTTCCTCTTCCTCTTCTTTGTTCCGACACAGAAGCTCTCCGGCT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828089.1:521190067-521190086
AGACTTCTCCCTCTCCCTCGGCGCAGCCCT521190067GCGCTTCTTCCTCTTCCTCTCTGCCGGTTCTTGGCGAATCCCTGCCGGGA
Ananas comosus genome assembly, chromosome: 17.
LR828297.1:2017280-2017299
GGAGAAGATGCGGCGGCGGCGGCGGCGGCG2017280GCGCTTCTTCCTCTTCCTCTTCCTCTCTCTCTTTCTTTTCTCCCTTTTTC
Allium cepa genome assembly, chromosome: 2.
LR994630.1:43469760-43469779
CGCAAATAACTTTATCGTCTTCATCCATTT43469760GCGCTTCTTCCTCTTCCTCTTCTTCTTCTTTGTCACCCTCTAATGGATTA
Metschnikowia zobellii genome assembly, chromosome: 1.
OW618028.1:110848-110867
TCAGCACTGGGTGTACATCAGTGACAACAT110848GCGCTTCTTCCTCTTCCTCTTTTTCGTGGTCTTGTAATGGATTTCCGCTC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX459972.1:524548941-524548960
AGACTTCTCCCTCTCCCTCGGCGCAGCCCT524548941GCGCTTCTTCCTCTTCCTCTCTGCCGGTTCTTGGCGAATCCCTGCCGGGA
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737395.1:1376007-1376026
TCTACGAGGCCGAGGCGAGGCGCCAGGGCG1376007GCGCTTCTTCCTCTTCCTCTTCCTCGTCGGCGAGGCAGCAGCAGGGGCAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737402.1:1380296-1380315
TCTACGAGGCCGAGGCGAGGCGCCAGGGCG1380296GCGCTTCTTCCTCTTCCTCTTCCTCGTCGGCGAGGCAGCAGCAGGGGCAG
Hordeum bulbosum genome assembly, chromosome: 7H_2.
OY737405.1:27182204-27182223
CTTCCTCTTCCTCTTGAGGCATCATGTTTT27182204GCGCTTCTTCCTCTTCCTCTTAGGCATCATGTTCAAATCTATACCTTCAT
Cardamine flexuosa genome assembly, chromosome: 2.
OY743215.1:20737953-20737972
TCTGAAGTTTGTGTCCTAGTTTCCGTATAA20737953GCGCTTCTTCCTCTTCCTCTTTGCATCTTGTTGTGTCTAGGTAATGTGAT
Cochlearia excelsa genome assembly, chromosome: 1.
OY748327.1:27732982-27733001
GTTCTCCGTGCAACCAGCATCTCCCCAATG27732982GCGCTTCTTCCTCTTCCTCTTCTTCGGGTCGAATCGACTCTTGGGGCACT
Leptographium flavum genome assembly, chromosome: 2.
OY756931.1:752414-752433
CCGAGTCTCCTCGTCAATCTCGTCTCGCCC752414GCGCTTCTTCCTCTTCCTCTTCCTCGTCCTCTTCCTTCCCACATGCCGTG
Marvania coccoides genome assembly, chromosome: 5.
OY978101.1:829846-829865
TCTCTCTCTAACTCTGTTTGCACCCTGGCG829846GCGCTTCTTCCTCTTCCTCTGCTGCAGCTGCGCTCTCCTTCTCTTTTCCC
Sphagnum tenellum genome assembly, chromosome: 10.
OY998151.1:7447891-7447910
AATTTTGTCTTCGTGGTTGTTCGTCTTCTT7447891GCGCTTCTTCCTCTTCCTCTTCTTGCGCTACCTTTCTTCTCTTTTTCTTT
Bacteroides sp. MSB163 chromosome, complete genome.
CP143867.1:1271166-1271185
CTTCCGTCTTTTCTTCGCTCTCCCGCCCGG1271166GCGCTTCTTCCTCTTCCTCTCTTCCGTTGCCGATGCGGAACCGCTCGTCT
Chitinophaga pinensis isolate 1 genome assembly, chromosome: 1.
LR632928.1:2136915-2136934
CTCCTTCATGGCCGGCGTAAAATACGCGCA2136915GCGCTTCTTCCTCTTCCTCTGTGCTCTCGCAGGCCCAATACTTCCCCAGC
Chitinophaga pinensis isolate 2 genome assembly, chromosome: 1.
LR632929.1:2136910-2136929
CTCCTTCATGGCCGGCGTAAAATACGCGCA2136910GCGCTTCTTCCTCTTCCTCTGTGCTCTCGCAGGCCCAATACTTCCCCAGC
Macrobrachium nipponense isolate FS-2020 chromosome 29.
CP062042.1:14805901-14805920
CTCTCAACTTTGCTTTTAACCTGACTCGAG14805901GCGCTTCTTCCTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCT
Amblyteles armatorius genome assembly, chromosome: 2.
OW121687.1:14323749-14323768
CGCACGAACCGCCGAGCTTCTTCCACCATC14323749GCGCTTCTTCCTCTTCCTCTTCGTCAGCCCTCGAACCCAGTCGGCCGGCG
Tiphia femorata genome assembly, chromosome: 1.
OX090895.1:20319973-20319992
CCCTCGTGGCTTTCTCGCGTTCTCCACTGC20319973GCGCTTCTTCCTCTTCCTCTTCCTCTCTCACTTTTTGCCCTTCTCGCGTC
Tiphia femorata genome assembly, chromosome: 8.
OX090902.1:4856728-4856747
GAGAGAACAACGCACGGACCTTCTGTCCTC4856728GCGCTTCTTCCTCTTCCTCTTGGCCTCTCTGCGTCACTCAAGCTCGTCGG
Lumbricus rubellus genome assembly, chromosome: 18.
OX243828.1:8665186-8665205
CAAACTTCTAAAGCGCAACTCGAAAGCCAA8665186GCGCTTCTTCCTCTTCCTCTTCCTCTTTCTTTTTCTCTTCCTCTTCCTCG
Epinotia demarniana genome assembly, chromosome: 13.
OX244272.1:3733647-3733666
AACGGTGGCATGTACATAATAATCGTGGTA3733647GCGCTTCTTCCTCTTCCTCTACCGGCTTTCTCCTCACTTCTACTGAGGGT
Anarsia innoxiella genome assembly, chromosome: 20.
OX387411.1:2273059-2273078
AGCACCAGATGGAGCAGCCTTTCTTCTGCG2273059GCGCTTCTTCCTCTTCCTCTTCTTCTGCCTTTGCCGTCGTAGGTGCAGCA
Tromatobia lineatoria genome assembly, chromosome: 6.
OX453039.1:1533507-1533526
TGTCTTCCTCGTACTAGATTCGCTCCTTTC1533507GCGCTTCTTCCTCTTCCTCTGCCTTCCATTTCGATTCTCCATTGTCCGTT
Agrotis exclamationis genome assembly, chromosome: 2.
OX465418.1:14030897-14030916
TTGGGGCTTCCCCCCCTCCTTCTTGCTCTT14030897GCGCTTCTTCCTCTTCCTCTTCGTGGTGGTCGCGTCCCTGTTGGTCGGCT
Anomoia purmunda genome assembly, chromosome: 2.
OX639994.1:70496127-70496146
AGAATCAAGTGGTTTGTTTCGAAATAATCA70496127GCGCTTCTTCCTCTTCCTCTTTACCATTATATTTCCGATAACTTTTGTTT
Anomoia purmunda genome assembly, chromosome: 5.
OX639997.1:20766179-20766198
CAATCATTCTGTCGTTTGTCTCCTTTTTCT20766179GCGCTTCTTCCTCTTCCTCTTTTTTTGGACTTTTTGTTAACAAATAATAA
Exephanes ischioxanthus genome assembly, chromosome: 6.
OY294020.1:6730312-6730331
CGATGTCTCGCTCCTTTCCTCTGGTTGTGC6730312GCGCTTCTTCCTCTTCCTCTTCTCCCCACTTCTGCGCGGTAGATCTCGAT
Sepiola atlantica genome assembly, chromosome: 33.
OY744547.1:63116554-63116573
ACGCGTGATTTTAAGTCTATAAAAGGGCAC63116554GCGCTTCTTCCTCTTCCTCTCCTTTTCCCCTCAGTGTTCTGGGCGTTCAC
Amblyjoppa fuscipennis genome assembly, chromosome: 2.
OY754489.1:41220244-41220263
CACTCTATGTCTCTCTCCGTTCCTCTGGAT41220244GCGCTTCTTCCTCTTCCTCTTTATCTTCCTCTTCTCCCTCTCCTGCACGG
Amblyjoppa proteus genome assembly, chromosome: 2.
OY998229.1:30909708-30909727
AATCGGACCTTCGGCCTCGAACTCTACTGT30909708GCGCTTCTTCCTCTTCCTCTTCCTCCTCTTCCTCTTCCTCTTCCTCCTCT
Amblyjoppa proteus genome assembly, chromosome: 4.
OY998231.1:21029385-21029404
GCACGAACCGCGCGAGCTTCTTCCACCACC21029385GCGCTTCTTCCTCTTCCTCTTCGTCAGCCCTCGAACCCAGTCGGCCAGCG
Pimpla rufipes genome assembly, chromosome: 1.
OZ010630.1:21880839-21880858
TCTTTCTCTCGTTCTCCTCTATCTTCTCCT21880839GCGCTTCTTCCTCTTCCTCTTCTTCCTTGTTTATTTATTTTTTTCTTCCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCGCTTCTTCCTCTTCCTCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCGCTTCTTCCTCTTCCTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.326 | 0.317 | search_plus_done; http://172.18.8.135:50400/match?q=GCGCTTCTTCCTCTTCCTCT&k=0&no_gap=0&offset=0&limit=50
0.423 | 0.097 | search_minus_done; http://172.18.8.135:50400/match?q=AGAGGAAGAGGAAGAAGCGC&k=0&no_gap=0&offset=0&limit=0
0.423 | 0.000 | cgi_end;

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