GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-15 17:38:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Hyperoplus immaculatus genome assembly, chromosome: 16.
OX442364.1:27182412-27182430
CAACGAAACAAATAAGGAAACAAAAAAAAG27182412GCGGCTATTGCAGAGTGAATTATAAACTTCTTCTTGAACAGATTTTTAC
Trifolium repens mRNA, clone: WCC17m21_039, unspecified EST.
FY460172.1:177-195
GTGGTTATTGCTGTTCTTGCAAAGCGCATT177GCGGCTATTGCAGAGTGAAATATTTTTAAATTTTCACATACTCTATTAA
Trifolium repens isolate ACLI19 chromosome 02_Occ.
CP125838.1:30032115-30032133
GTGGTTATTGCTGTTCTTGCAAAGCGCATT30032115GCGGCTATTGCAGAGTGAAATATTTTTAAATTTTCACATACTCTATTAA
Trifolium repens isolate ACLI19 chromosome 02_Pall.
CP125839.1:27629749-27629767
GTGGTTATTGCGGTTCTTGCAAAGCGCATT27629749GCGGCTATTGCAGAGTGAAAAGACTCTATTAAGTGGCACCTCAATACCA
Kluyvera sp. CRP chromosome, complete genome.
CP082841.1:4728354-4728372
GCCAGAGAATCATGATCCCCCCACTCCGCG4728354GCGGCTATTGCAGAGTGAAGGAATTTCTACACCAGGACGTTATGTATTC
Horisme vitalbata genome assembly, chromosome: Z.
OX638089.1:29763021-29763039
GCCTCGCCACGCCACCTCTGCCGTACTGTC29763021GCGGCTATTGCAGAGTGAAGATTATTCACTTTAGATGGACACTATCAAG
Sylvilagus floridanus genome assembly, chromosome: 16.
OX463238.1:43566928-43566946
CAGAGAAAAAGGTCTTCCATTTTCCATTGG43566928TTCACTCTGCAATAGCCGCTGTAGCCAGTGCACTGCAGCCTGTGCACCA
Ammodytes marinus genome assembly, chromosome: 16.
OX465160.1:1877639-1877657
GTAAAAATCTGTTCAAGAAGAAGTTCATAA1877639TTCACTCTGCAATAGCCGCTTTTTTTTGTTTCCTTATTTGTTTCGTTGA
Kluyvera genomosp. 3 strain PO2S7 chromosome.
CP050321.1:1489475-1489493
GAATACATAACGTCCTGGTGTAGAAATTCC1489475TTCACTCTGCAATAGCCGCCGCGGAGTGGGGGGATCATGATTCTCTGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCGGCTATTGCAGAGTGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCGGCTATTGCAGAGTGAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.184 | 0.175 | search_plus_done; http://172.18.8.135:50400/match?q=GCGGCTATTGCAGAGTGAA&k=0&no_gap=0&offset=0&limit=50
0.217 | 0.033 | search_minus_done; http://172.18.8.135:50400/match?q=TTCACTCTGCAATAGCCGC&k=0&no_gap=0&offset=0&limit=44
0.219 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).