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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-05 21:39:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Crataerina pallida genome assembly, chromosome: 3.
OX453291.1:24609367-24609385
TAATGGTTGGGGGAGATTTTTACACCAAAT24609367GCGGTATAATGTCGGTTGAAGATATCACTGTAATAATCTGGCCGTAAAT
Thermoclostridium stercorarium subsp. stercorarium DSM 8532 chromosome, complete genome.
CP003992.2:1834186-1834204
AGGGCGCGACCTGCTTCCATCTGGCCTGGA1834186TCAACCGACATTATACCGCTTCTCATGATTTCAGACACATACGCCCCGC
Thermoclostridium stercorarium subsp. stercorarium DSM 8532 chromosome, complete genome.
CP004044.1:1834656-1834674
AGGGCGCGACCTGCTTCCATCTGGCCTGGA1834656TCAACCGACATTATACCGCTTCTCATGATTTCAGACACATACGCCCCGC
Pseudoalteromonas tunicata strain D2 chromosome I, complete sequence.
CP011032.1:2582614-2582632
AATAATGGGGCTAAGCCAATTTGTGCCACT2582614TCAACCGACATTATACCGCTGACATAAGTACCGGTACCAAACGCTTTAA
Thermoclostridium stercorarium subsp. thermolacticum DSM 2910 chromosome, complete genome.
CP014672.1:1897101-1897119
AGGGCGCGACCTGCTTCCATCTGGCCTGGA1897101TCAACCGACATTATACCGCTTCTCATGATTTCAGACACATACGCCCCGC
Thermoclostridium stercorarium subsp. leptospartum DSM 9219 chromosome, complete genome.
CP014673.1:1887552-1887570
AGGGCGCGACCTGCTTCCATCTGGCCTGGA1887552TCAACCGACATTATACCGCTTCTCATGATTTCAGACACATACGCCCCGC
Pseudoalteromonas tunicata strain D2 chromosome 1, complete sequence.
CP031961.1:1885722-1885740
AATAATGGGGCTAAGCCAATTTGTGCCACT1885722TCAACCGACATTATACCGCTGACATAAGTACCGGTACCAAACGCTTTAA
Thermoclostridium stercorarium strain RKWS1 chromosome, complete genome.
CP110889.1:1839713-1839731
AGGGCGCGACCTGCTTCCATCTGGCCTGGA1839713TCAACCGACATTATACCGCTTCTCATGATTTCAGACACATACGCCCCGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCGGTATAATGTCGGTTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCGGTATAATGTCGGTTGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.105 | 0.096 | search_plus_done; http://172.18.8.135:50400/match?q=GCGGTATAATGTCGGTTGA&k=0&no_gap=0&offset=0&limit=50
0.130 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=TCAACCGACATTATACCGC&k=0&no_gap=0&offset=0&limit=49
0.135 | 0.005 | cgi_end;

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