GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-20 08:08:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

MBENH73TR mth2 Medicago truncatula genomic clone 7N2, genomic survey sequence.
CG954567.1:649-668
GGTGACTTACGAATCGGTGAAGAAGCGGAA649GCGGTTGAGTAACGATCTGGAACACGCAACGCAAGAAGAAGGTGAGAAGG
Medicago arabica genome assembly, chromosome: 6.
OX326969.1:52719114-52719133
GATAAAGGCGACTTACGAATCGGTGAAGAA52719114GCGGTTGAGTAACGATCTGGAACACGCAACGCAAGAAGAAGGTGTGAAGG
Vicia faba genome assembly, chromosome: 5.
OX451740.1:950467721-950467740
AGTGGCTTACGAATCGGTGATGAGGCGGCA950467721GCGGTTGAGTAACGATCTGGAAGACGGAAGATGAGAGAGAAAATGAGGAA
Trifolium dubium genome assembly, chromosome: 4.
OX638065.1:46636070-46636089
GATGAAGCGGAAGAGGAATCGGAATCGGAA46636070GCGGTTGAGTAACGATCTGGAAGAGGGAAGAAGGAAGGATGGTGTGAGGG
Trifolium dubium genome assembly, chromosome: 11.
OX638072.1:33841953-33841972
ATTGGAGATGAAGCGGAAGAGGAATCGGAA33841953GCGGTTGAGTAACGATCTGGAAGATGATGAAAGAGAGGAAGAAGGAAGGA
Lathyrus sativus genome assembly, chromosome: 3.
OZ012737.1:641965173-641965192
AGTGGCTTACGAATCGGTGAAGAGGCGGCA641965173GCGGTTGAGTAACGATCTGGAAGACGGAAGATGAGAGAGAAAATGAGGAA
T110504e KV0 Medicago truncatula cDNA clone pKV0-1K6, mRNA sequence.
AI974550.1:112-131
CCTTCTCACCTTCTTCTTGCGTTGCGTGTT112CCAGATCGTTACTCAACCGCTTCCGCTTCTTCACCGATTCGTTTCTTGTT
Medicago truncatula EST MtBA35A08F1 : T3 end of clone MtBA35A08 of cDNA library MtBA from root tips of cultivar Jemalong of Medicago truncatula (barrel medic).
AL370036.1:90-109
CCTTCTCACCTTCTTCTTGCGTTGCGTGTT90CCAGATCGTTACTCAACCGCTTCCGCTTCTTCACCGATTCGTTTCTTGTT
EST304943 KV2 Medicago truncatula cDNA clone KV2-5L18, mRNA sequence.
AW256806.1:101-120
CCTTCTCACCTTCTTCTTGCGTTGCGTGTT101CCAGATCGTTACTCAACCGCTTCCGCTTCTTCACCGATTCGTTTCTTGTT
METAT90TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
EY476666.1:125-144
CCTTCTCACCTTCTTCTTGCGTTGCGTGTT125CCAGATCGTTACTCAACCGCTTCCGCTTCTTCACCGATTCGATTTATTAG
Vicia faba mRNA, clone: VfRES11C23, unspecified EST.
HX914918.1:32-51
TTCCTCATTTTCTCTCTCATCTTCCGTCTT32CCAGATCGTTACTCAACCGCTGCCGCCTCATCACCGATTCGTTGAATTAA
Medicago truncatula clone mth2-36h10, complete sequence.
AC128638.34:108398-108417
CCTTCTCACCTTCTTCTTGCGTTGCGTGTT108398CCAGATCGTTACTCAACCGCTTCCGCTTCTTCACCGATTCGTAAGTCACC
Medicago truncatula chromosome 7 clone mth2-26k20, complete sequence.
AC155887.2:1557-1576
CCTTCTCACCTTCTTCTTGCGTTGCGTGTT1557CCAGATCGTTACTCAACCGCTTCCGCTTCTTCACCGATTCGTAAGTCACC
Medicago lupulina genome assembly, chromosome: 2.
OY283140.1:7267989-7268008
CACCTTCTTCTTCTTGCGTTGTTGCGTGTT7267989CCAGATCGTTACTCAACCGCTTCTTCACCGATTCGTAAGTCACCTTTATC
Lathyrus aphaca genome assembly, chromosome: 7.
OZ014525.1:67642869-67642888
TTCCTCATTTTCTCTCTCATCTTCCGTCTT67642869CCAGATCGTTACTCAACCGCTGCCGCCTCTTCACCGATTCGTAAGCCACT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCGGTTGAGTAACGATCTGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCGGTTGAGTAACGATCTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.117 | 0.109 | search_plus_done; http://172.18.8.135:50400/match?q=GCGGTTGAGTAACGATCTGG&k=0&no_gap=0&offset=0&limit=50
0.356 | 0.239 | search_minus_done; http://172.18.8.135:50400/match?q=CCAGATCGTTACTCAACCGC&k=0&no_gap=0&offset=0&limit=44
0.363 | 0.006 | cgi_end;

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