GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 06:14:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

WS0272.BR_D06 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS0272_D06 3, mRNA sequence.
DR507464.1:43-62
GAATCCACGGAAGAGGGCTGTGGAGGAAGC43GCGTCAGATACTGAACATAGATTCGTCGTCCTCGTCATCTGATCAAAACG
WS02740.CR_D19 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02740_D19 3, mRNA sequence.
DR515316.1:43-62
GAATCCACGGAAGAGGGCTGTGGAGGAAGC43GCGTCAGATACTGAACATAGATTCGTCGTCCTCGTCATCTGATCAAAACG
GQ0201.B3_L16 GQ020: Clean ROOTS systems -Diurnal cycle Picea glauca cDNA clone GQ0201_L16 5', mRNA sequence.
DV984651.2:296-315
GAATCCACGGAAGAGGGCTGTGGAGGAAGC296GCGTCAGATACTGAACATAGATTCGTCGTCCTCGTCATCTGATCAAAACG
GQ02765.B3_D03 GQ099: Mixed spruce tissues Picea glauca cDNA clone GenomeQuebec_Id:GQ02765_D03 5', mRNA sequence.
DV996008.1:296-315
GAATCCACGGAAGAGGGCTGTGGAGGAAGC296GCGTCAGATACTGAACATAGATTCGTCGTCCTCGTCATCTGATCAAAACG
WS02783.CR.1_M15 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02783_M15 3', mRNA sequence.
ES861237.1:43-62
GAATCCACGGAAGAGGGCTGTGGAGGAAGC43GCGTCAGATACTGAACATAGATTCGTCGTCCTCGTCATCTGATCAAAACG
WS02794.CR_D23 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02794_D23 3', mRNA sequence.
ES866058.1:683-702
GAATCCACGGAAGAGGGCTGTGGAGGAAGC683GCGTCAGATACTGAACATAGATTCGTCGTCCTCGTCATCTGACCAAAACG
GQ03516.B7_H03 GQ035 - Needles - End of season Picea glauca cDNA clone GQ03516_H03 5', mRNA sequence.
EX406626.1:844-863
GAATCCACGGAAGAGGGCTGTGGAGGAAGC844GCGTCAGATACTGAACATAGATTCGTCGTCCTCGTCATCTGATCAAA
GQ0201.B3.r_L16 GQ020: Clean ROOTS systems -Diurnal cycle Picea glauca cDNA clone GQ0201_L16 5', mRNA sequence.
GE480923.1:296-315
GAATCCACGGAAGAGGGCTGTGGAGGAAGC296GCGTCAGATACTGAACATAGATTCGTCGTCCTCGTCATCTGATCAAAACG
GQ03516.B7P5_H03 GQ035 - Needles - End of season Picea glauca cDNA clone GQ03516_H03 5', mRNA sequence.
GT739350.1:5-24
AAGC5GCGTCAGATACTGAACATAGATTCGTCGTCCTCGTCATCTGATCAAAACG
Picea sitchensis clone WS0273_B21 unknown mRNA.
EF084080.1:958-977
GAATCCACGGAAGAGGGCTGTGGAGGAAGC958GCGTCAGATACTGAACATAGATTCGTCGTCCTCGTCATCTGATCAAAACG
WS02727.CR_D13 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02727_D13 3, mRNA sequence.
DR510059.1:83-102
CGTTTTGATCAGATGACGAGGACGACGAAT83CTATGTTCAGTATCTGACGCGCTTCCTCCACAGCCCTCTTCCGTGGATTC
WS0273.BR_B21 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS0273_B21 3, mRNA sequence.
DR511025.1:86-105
CGTTTTGATCAGATGACGAGGACGACGAAT86CTATGTTCAGTATCTGACGCGCTTCCTCCACAGCCCTCTTCCGTGGATTC
WS02752.CR_P11 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02752_P11 3, mRNA sequence.
DR519718.1:77-96
CGTTTTGATCAGATGACGAGGACGACGAAT77CTATGTTCAGTATCTGACGCGCTTCCTCCACAGCCCTCTTCCGTGGATTC
WS02753.CR_A07 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02753_A07 3, mRNA sequence.
DR519737.1:89-108
CGTTTTGATCAGATGACGAGGACGACGAAT89CTATGTTCAGTATCTGACGCGCTTCCTCCACAGCCCTCTTCCGTGGATTC
WS0272.B21_D06 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS0272_D06 5, mRNA sequence.
DR525506.1:701-720
CGTTTTGATCAGATGACGAGGACGACGAAT701CTATGTTCAGTATCTGACGCGCTTCCTCCACAGCCCTCTTCCGTGGATTC
WS02740.C21_D19 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02740_D19 5, mRNA sequence.
DR533385.1:701-720
CGTTTTGATCAGATGACGAGGACGACGAAT701CTATGTTCAGTATCTGACGCGCTTCCTCCACAGCCCTCTTCCGTGGATTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCGTCAGATACTGAACATAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCGTCAGATACTGAACATAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.578 | 0.570 | search_plus_done; http://172.18.8.135:50400/match?q=GCGTCAGATACTGAACATAG&k=0&no_gap=0&offset=0&limit=50
0.835 | 0.257 | search_minus_done; http://172.18.8.135:50400/match?q=CTATGTTCAGTATCTGACGC&k=0&no_gap=0&offset=0&limit=40
0.840 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).