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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-11 17:13:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

51-E022899-021-017-E14-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022E1417Q, mRNA sequence.
CX191679.1:37-56
TCTCCAAAGACGACATGGCCATGCTCGGAG37GCGTTCGCGATTTACCTGCTAACGAGAACAGTGTGGAGGTCGAGAGCCTC
18-E022768-021-014-D06-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022D0614Q, mRNA sequence.
CX194563.1:37-56
TCTCCAAAGACGACATGGCCATGCTCGGAG37GCGTTCGCGATTTACCTGCTAACGAGAACAGTGTGGAGGTCGAGAGCCTC
Brassica oleracea var. viridis mRNA, clone: KALE-126B22, 5' end sequence.
DK503780.1:78-97
TCTCCAAAGACGACATGGCCATGCTCGGAG78GCGTTCGCGATTTACCTGCTAACGAGAACAGTGTGGAGGTCGAGAGCCTC
Brassica oleracea var. viridis mRNA, clone: KALE-127E12, 5' end sequence.
DK504224.1:78-97
TCTCCAAAGACGACATGGCCATGCTCGGAG78GCGTTCGCGATTTACCTGCTAACGAGAACAGTGTGGAGGTCGAGAGCCTC
Brassica oleracea var. viridis mRNA, clone: KALE-126B22, 3' end sequence.
DK563342.1:28-47
CCAAAGACGACATGGCCATGCTCGGAG28GCGTTCGCGATTTACCTGCTAACGAGAACAGTGTGGAGGTCGAGAGCCTC
Brassica oleracea var. viridis mRNA, clone: KALE-127E12, 3' end sequence.
DK563786.1:76-95
TCTCCAAAGACGACATGGCCATGCTCGGAG76GCGTTCGCGATTTACCTGCTAACGAGAACAGTGTGGAGGTCGAGAGCCTC
Brassica napus genome assembly, chromosome: C01.
HG994365.1:48026085-48026104
TCTCCAAAGACGACATGGCCATGCTCGGAG48026085GCGTTCGCGATTTACCTGCTAACGAGAACAGTGTGGAGGTCGAGAGCCTC
Brassica oleracea var. italica cysteine protease inhibitor (CPI-1) mRNA, complete cds.
JQ844163.1:74-93
TCTCCAAAGACGACATGGCCATGCTCGGAG74GCGTTCGCGATTTACCTGCTAACGAGAACAGTGTGGAGGTCGAGAGCCTC
Brassica oleracea HDEM genome, scaffold: C1.
LR031878.1:46972185-46972204
TCTCCAAAGACGACATGGCCATGCTCGGAG46972185GCGTTCGCGATTTACCTGCTAACGAGAACAGTGTGGAGGTCGAGAGCCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCGTTCGCGATTTACCTGCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCGTTCGCGATTTACCTGCT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.715 | 0.706 | search_plus_done; http://172.18.8.135:50400/match?q=GCGTTCGCGATTTACCTGCT&k=0&no_gap=0&offset=0&limit=50
0.823 | 0.108 | search_minus_done; http://172.18.8.135:50400/match?q=AGCAGGTAAATCGCGAACGC&k=0&no_gap=0&offset=0&limit=41
0.823 | 0.000 | cgi_end;

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